DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1116 and Rgp1

DIOPT Version :9

Sequence 1:NP_730894.2 Gene:CG1116 / 40622 FlyBaseID:FBgn0037297 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_766454.1 Gene:Rgp1 / 242406 MGIID:1915956 Length:391 Species:Mus musculus


Alignment Length:448 Identity:159/448 - (35%)
Similarity:227/448 - (50%) Gaps:83/448 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIEIKAKLLRADSAIYATGERVQCLIEFTHKVFSDEPAASQAVHNANEARSQENLAWASAQLHCY 65
            |||:.|:|.|  ..::..||.::|::..|:.:   .|.|:.|        |.|.|||||||:||.
Mouse     1 MIEVVAELSR--GPVFLAGEALECVVTVTNPL---PPTATSA--------SSEALAWASAQIHCQ 52

  Fly    66 RKTSYSTSA---GDRAAELTEMIGRTALDAVTQAPGEVIVATKPKILFCDLRLQPGETKMYFFNE 127
            ...|.|..|   .|.:....:...:|.........|:.|::|.||||||||||.|||:|.|.::|
Mouse    53 FHASESRVALPPPDSSQPDVQPDSQTVFLPHRGERGQCILSTPPKILFCDLRLDPGESKSYSYSE 117

  Fly   128 FIPRDGPPTYRGHNIRYFYKITIATQRVKSKVQTLAVPIRVLPIPIISRPDELPVTVETNEELAP 192
            .:|.:|||::||.:::|.||:||..|||.|.:..|.||:|||.:..:.     .|....:|.:||
Mouse   118 VLPTEGPPSFRGQSVKYVYKLTIGCQRVNSPITLLRVPLRVLVLTGLQ-----DVHFPQDEAVAP 177

  Fly   193 TNPFLE-----KREISELEISWHHLKNVTARRAPKFYRISNKRGFVGRFCLFKPAYKLGEDIVGS 252
            ::||||     |::....|::...|...|:.|:...|.||:.||.||.|.:||..|:||||:||:
Mouse   178 SSPFLEEDDSGKKDSWLAELAGERLMAATSCRSLHLYNISDGRGKVGTFGIFKSVYRLGEDVVGT 242

  Fly   253 LDFDPGVNPRKVRCVQFSVKLQQQELSIRPQPVQNHQLQSQSSTGDDVSSMNSFDMASIASGVLA 317
            |:...|.    |.|:||||.||.:|   |.||    :.|.:..||             :|..|  
Mouse   243 LNLGEGT----VACLQFSVSLQTEE---RVQP----EYQRRRGTG-------------VAPSV-- 281

  Fly   318 DNLHKSATSASSKVKEAPEPTGKLSTISTSHQ-VCYATLQTQVVVPIPLHVTPTFRTDLVDVRWR 381
                       |.|..|            .|| .|..|.:|...:||||..||.|.|.:|.::||
Mouse   282 -----------SHVTHA------------RHQESCLHTTRTSFSLPIPLCSTPGFCTAIVSLKWR 323

  Fly   382 LHFEFVTT-----TLIDFGIPNPESGELKAPSEMPVETMVWNLPVTVYAANP-LQIYA 433
            |||||||:     .|:. .:..||......|.::||:|..|:||:.|...:| |..||
Mouse   324 LHFEFVTSREPGLVLLP-PLEQPEPATWTGPEQVPVDTFSWDLPIKVLPTSPTLVSYA 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1116NP_730894.2 Rgp1 <101..388 CDD:285895 112/292 (38%)
Rgp1NP_766454.1 Rgp1 <91..331 CDD:370091 113/293 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849363
Domainoid 1 1.000 92 1.000 Domainoid score I7641
eggNOG 1 0.900 - - E1_KOG4469
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8863
Inparanoid 1 1.050 218 1.000 Inparanoid score I3567
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48632
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005628
OrthoInspector 1 1.000 - - oto92079
orthoMCL 1 0.900 - - OOG6_104371
Panther 1 1.100 - - LDO PTHR12507
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4045
SonicParanoid 1 1.000 - - X5274
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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