DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R2 and PRE1

DIOPT Version :9

Sequence 1:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_010928.1 Gene:PRE1 / 856731 SGDID:S000000814 Length:198 Species:Saccharomyces cerevisiae


Alignment Length:200 Identity:42/200 - (21%)
Similarity:78/200 - (39%) Gaps:36/200 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 VVGIVFDGGVIIGAESRATSGGIVFSKTCRKIIELQANIFAAGAGTARDTKALVELTRAQLELHR 116
            ::||.....||:.:....|.|..|...:..|..:|..:...:.||.|.||....|..:|.::|:.
Yeast     4 ILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQANIQLYS 68

  Fly   117 MNTGFRKVPVCCANQMIRQLL---FRFNGNIDADMIIGGAD--NTGAHLFCTRSDGSTDTAPFTS 176
            :...:...|. ..:..:||.|   .|.......:::|||.|  .....|:.....|:....|:.:
Yeast    69 IREDYELSPQ-AVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLGTKVELPYGA 132

  Fly   177 IG-SGYQVSMSILESRWSEDLSEESACALACDAVAAGMKNDLCSGGKVSLCVVRCDFSVQWPEQL 240
            .| ||: .:.|:|:..:..|::.|....|                  :.|||          ::|
Yeast   133 HGYSGF-YTFSLLDHHYRPDMTTEEGLDL------------------LKLCV----------QEL 168

  Fly   241 PRQVP 245
            .:::|
Yeast   169 EKRMP 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R2NP_649515.3 PRE1 9..228 CDD:223711 39/181 (22%)
proteasome_beta_type_7 50..239 CDD:239732 40/192 (21%)
PRE1NP_010928.1 proteasome_beta_type_2 1..194 CDD:239727 41/199 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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