DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R2 and PUP1

DIOPT Version :9

Sequence 1:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_014800.3 Gene:PUP1 / 854328 SGDID:S000005683 Length:261 Species:Saccharomyces cerevisiae


Alignment Length:247 Identity:102/247 - (41%)
Similarity:151/247 - (61%) Gaps:12/247 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 SGFTFDNCLRNKQLKENGLEEPNSFTTGTTVVGIVFDGGVIIGAESRATSGGIVFSKTCRKIIEL 86
            :|.:|||..||..|.||...:|.:.:||||:||:.|:.||:|.|::|:|.|.||..|.|.|:..:
Yeast     2 AGLSFDNYQRNNFLAENSHTQPKATSTGTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRI 66

  Fly    87 QANIFAAGAGTARDTKALVELTRAQLELHRMNTGFRKVPVCCANQMIRQLLFRFNGNIDADMIIG 151
            ...|:.||||||.||:|:.:|..:.:|||.:.|. |:..|..|.||::|.||::.|:|.|.:|:.
Yeast    67 SPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTS-REPRVVSALQMLKQHLFKYQGHIGAYLIVA 130

  Fly   152 GADNTGAHLFCTRSDGSTDTAPFTSIGSGYQVSMSILESRWSEDLSEESACALACDAVAAGMKND 216
            |.|.||:|||...:.||||...:.|:|||...:|::|||.|.:||::|.|..||.||:.||:.||
Yeast   131 GVDPTGSHLFSIHAHGSTDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWND 195

  Fly   217 LCSGGKVSLCVVRCDFSVQWPEQLPRQVPPT------RTYRLSPKPGRTTIL 262
            |.||..|.:||:......   |.|...:.|.      ::|:. |: |.|.:|
Yeast   196 LGSGSNVDVCVMEIGKDA---EYLRNYLTPNVREEKQKSYKF-PR-GTTAVL 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R2NP_649515.3 PRE1 9..228 CDD:223711 93/205 (45%)
proteasome_beta_type_7 50..239 CDD:239732 82/188 (44%)
PUP1NP_014800.3 proteasome_beta_type_7 30..219 CDD:239732 84/192 (44%)
Pr_beta_C 223..257 CDD:403609 5/22 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341929
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S457
OMA 1 1.010 - - QHG53608
OrthoFinder 1 1.000 - - FOG0001188
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.760

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