DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R2 and PBB1

DIOPT Version :10

Sequence 1:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_566818.1 Gene:PBB1 / 822364 AraportID:AT3G27430 Length:273 Species:Arabidopsis thaliana


Alignment Length:267 Identity:102/267 - (38%)
Similarity:157/267 - (58%) Gaps:10/267 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GFTFDNCLRNKQLKENGLEEPNSFTTGTTVVGIVFDGGVIIGAESRATSGGIVFSKTCRKIIELQ 87
            ||:||.|.||..|.:.||:.|:...||||:||::|..|||:||::|||.|.||..|.|.||..:.
plant    13 GFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMA 77

  Fly    88 ANIFAAGAGTARDTKALVELTRAQLELHRMNTGFRKVPVCCANQMIRQLLFRFNGNIDADMIIGG 152
            .||:..|||||.||:|:.::..:||.|||..|| |...|..|..::::.||.:.|::.|.:::||
plant    78 PNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTG-RDSRVITALTLLKKHLFSYQGHVSAALVLGG 141

  Fly   153 ADNTGAHLFCTRSDGSTDTAPFTSIGSGYQVSMSILESRWSEDLSEESACALACDAVAAGMKNDL 217
            .|.||.||......|||||.||.::|||...:||:.|:::.|.|:.:....|..:::.:|:.|||
plant   142 VDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDL 206

  Fly   218 CSGGKVSLCVV---RCDFSVQWPEQLPRQVPPTRTYRLSPKPGRTTILSTLVHPVLSWRGALALP 279
            .||..|.:||:   ..::...:.|..||....::.|..:.|   |.:|.|.:.|:|.   .:.:.
plant   207 GSGSNVDICVITKGNKEYLRNYMEPNPRTYVSSKGYSFTKK---TEVLLTKITPLLE---RVEIT 265

  Fly   280 EPGGSQE 286
            |.|.:.|
plant   266 EVGEAME 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R2NP_649515.3 proteasome_beta_type_7 50..239 CDD:239732 76/191 (40%)
PBB1NP_566818.1 proteasome_beta_type_7 40..228 CDD:239732 76/188 (40%)

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