DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta2R2 and AT3G26340

DIOPT Version :10

Sequence 1:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_189265.1 Gene:AT3G26340 / 822238 AraportID:AT3G26340 Length:273 Species:Arabidopsis thaliana


Alignment Length:236 Identity:65/236 - (27%)
Similarity:107/236 - (45%) Gaps:21/236 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NGLPTLMK---YPDRSPFLCG---------PSGFTFDNCLRNKQLKENGLEEPNSFTTGTTVVGI 55
            :||.|.|.   :...|..|.|         |....||..    |.|...:.:|   ..|||.:..
plant     6 SGLETTMPVIGFGSNSEMLDGFSSAPSFDLPRTTDFDGF----QKKAVEMVKP---AKGTTTLAF 63

  Fly    56 VFDGGVIIGAESRATSGGIVFSKTCRKIIELQANIFAAGAGTARDTKALVELTRAQLELHRMNTG 120
            :|..||::.|:|||:.||.:.|::.:||||:...:....||.|.|.:........:..||.: ..
plant    64 IFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHEL-AN 127

  Fly   121 FRKVPVCCANQMIRQLLFRFNG-NIDADMIIGGADNTGAHLFCTRSDGSTDTAPFTSIGSGYQVS 184
            .|::.|..|::::..:|:.:.| .:....:|.|.|.||..|:...::|........|:|||...:
plant   128 KRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKGDRFSVGSGSPYA 192

  Fly   185 MSILESRWSEDLSEESACALACDAVAAGMKNDLCSGGKVSL 225
            ..:|:|.:..|:|.|.|..||..::......|..|||..|:
plant   193 YGVLDSGYKFDMSVEEASELARRSIYHATFRDGASGGVASV 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R2NP_649515.3 proteasome_beta_type_7 50..239 CDD:239732 51/177 (29%)
AT3G26340NP_189265.1 proteasome_beta_type_5 58..245 CDD:239730 51/177 (29%)

Return to query results.
Submit another query.