DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R2 and Psmb11

DIOPT Version :10

Sequence 1:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_780413.1 Gene:Psmb11 / 73902 MGIID:1921152 Length:302 Species:Mus musculus


Alignment Length:201 Identity:55/201 - (27%)
Similarity:91/201 - (45%) Gaps:18/201 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 EPNSF--------TTGTTVVGIVFDGGVIIGAESRATSGGIVFSKTCRKIIELQANIFAAGAGTA 98
            :|.:|        ..|||.:...|..|||..|::|::.|..|.....||:|.:...:....:||:
Mouse    34 DPQTFLQIHGPRLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASRKVIPVHQRLLGTTSGTS 98

  Fly    99 RDTKALVELTRAQLELHRMNTGFRKVP-VCCANQMIRQLLFRFNGNIDADMIIG----GADNTGA 158
            .|......:.|.:|.|..:..|  ::| |....:::..::..:.|   .|:.:.    |.|::|.
Mouse    99 ADCATWYRVLRRELRLRELREG--QLPSVAGTAKLLAAMMSCYRG---LDLCVATALCGWDHSGP 158

  Fly   159 HLFCTRSDGSTDTAPFTSIGSGYQVSMSILESRWSEDLSEESACALACDAVAAGMKNDLCSGGKV 223
            .||...|||:.......|:|||...:..:|:..:..|::.:.|..||..|||.....|..|||.|
Mouse   159 ALFYVYSDGTCLQGDIFSVGSGSPYAYGVLDRGYHYDMTIQEAYTLARCAVAHATHRDAYSGGSV 223

  Fly   224 SLCVVR 229
            .|..||
Mouse   224 DLFHVR 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R2NP_649515.3 proteasome_beta_type_7 50..239 CDD:239732 52/185 (28%)
Psmb11NP_780413.1 proteasome_beta_type_5 50..237 CDD:239730 52/185 (28%)

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