DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R2 and psmb12

DIOPT Version :10

Sequence 1:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_571751.1 Gene:psmb12 / 64279 ZFINID:ZDB-GENE-001208-1 Length:217 Species:Danio rerio


Alignment Length:188 Identity:61/188 - (32%)
Similarity:98/188 - (52%) Gaps:5/188 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 NSFTTGTTVVGIVFDGGVIIGAESRATSG-GIVFSKTCRKIIELQANIFAAGAGTARDTKALVEL 107
            |..:||||::.:.|:||||||::|||:.| ..|.|||..|:|::...||...||:..|.:|:.::
Zfish    11 NGVSTGTTILAVKFNGGVIIGSDSRASMGESYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKM 75

  Fly   108 TRAQLELHRMNTGFRKVP-VCCANQMIRQLLFRFNGNIDADMIIGGAD-NTGAHLFCTRSDGSTD 170
            .:.||..|.:.  ....| |..|..::|:|.:.....:.|..|..|.| ..|..::.....|...
Zfish    76 AKFQLSFHSIQ--MESPPLVKAAASIMRELCYSNKEELRAGFITAGWDRKKGPQIYVVSLGGMLL 138

  Fly   171 TAPFTSIGSGYQVSMSILESRWSEDLSEESACALACDAVAAGMKNDLCSGGKVSLCVV 228
            :.|||..|||.......:::::..|::.|.|...:.:|:|..|..|..|||.|.|.|:
Zfish   139 SQPFTIGGSGSTYIYGYVDAKFKPDMTLEEATQFSTNALALAMGRDNVSGGVVHLVVI 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R2NP_649515.3 proteasome_beta_type_7 50..239 CDD:239732 58/182 (32%)
psmb12NP_571751.1 proteasome_beta_type_6 17..205 CDD:239731 58/182 (32%)

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