DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R2 and psma3

DIOPT Version :9

Sequence 1:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_001025358.1 Gene:psma3 / 564370 ZFINID:ZDB-GENE-050913-120 Length:255 Species:Danio rerio


Alignment Length:166 Identity:36/166 - (21%)
Similarity:64/166 - (38%) Gaps:32/166 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 TTVVGIVFDGGVIIGAESRATSGGIVFSK-----TCRKIIELQANIFAAGAGTARDTKALVELTR 109
            :|.:||....||:.|.|.      :|.||     :.::|..:..::..|.||...|.::|.|:.|
Zfish    35 STAIGIRCKDGVVFGVEK------LVLSKLYEEGSNKRIFNIDRHVGMAVAGLLADARSLSEVAR 93

  Fly   110 AQLELHRMNTGFRKVPVCCANQMIRQLLFRFNGNIDA------------DMIIGGAD-NTGAHLF 161
            .:....|.|.| ..:|       ::.|..|....:.|            ..|:|..| :.|..|:
Zfish    94 EEASSFRSNYG-HDIP-------LKHLADRVAMYVHAYTLYSAVRPFGCSFILGSYDEDDGPQLY 150

  Fly   162 CTRSDGSTDTAPFTSIGSGYQVSMSILESRWSEDLS 197
            .....|........:||...|.:.:.:|....:|::
Zfish   151 MVDPSGIAYGYWGCAIGKAKQAAKTEIEKLQMKDMT 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R2NP_649515.3 PRE1 9..228 CDD:223711 36/166 (22%)
proteasome_beta_type_7 50..239 CDD:239732 36/166 (22%)
psma3NP_001025358.1 proteasome_alpha_type_3 5..217 CDD:239720 36/166 (22%)
PRE1 6..241 CDD:223711 36/166 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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