DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R2 and psmb4

DIOPT Version :10

Sequence 1:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_001017801.1 Gene:psmb4 / 550499 ZFINID:ZDB-GENE-050417-333 Length:215 Species:Danio rerio


Alignment Length:198 Identity:45/198 - (22%)
Similarity:81/198 - (40%) Gaps:23/198 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 TGTTVVGIVFDGGVIIGAESRATSGGIVFSKTCRKIIELQANIFAAGAGTARD---TKALVELTR 109
            |||:|:|:.|.|||||.|:...:.|.:...:...:::::..:.....:|...|   .|.::|...
Zfish     3 TGTSVLGVKFKGGVIIAADMLGSYGSLARFRNISRLMKVNNSTILGASGDYADYQYLKQIIEQMV 67

  Fly   110 AQLELHRMNTGFRKVPVCCANQMIRQLLFRFNGNIDADM-------IIGGADNTGAHLFCTRSDG 167
            ...||  :..|....|     :.|...|.|...|..:.|       :|||..|..:.|......|
Zfish    68 IDEEL--LGDGHSYTP-----KAIHSWLTRVMYNRRSKMNPLWNTVVIGGFYNGESFLGYVDKLG 125

  Fly   168 STDTAPFTSIGSGYQVSM----SILESRWSEDLSEESACALACDAVAAGMKNDLCSGGKVSLCVV 228
            ....||..:.|.|..::.    .::|::  |::::|.|..|....:......|..|..:..:.:|
Zfish   126 VAYEAPTVATGFGAYLAQPLMREVIENK--EEITKEEARELIERCLKVLYYRDARSYNRHEIAIV 188

  Fly   229 RCD 231
            ..|
Zfish   189 TAD 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R2NP_649515.3 proteasome_beta_type_7 50..239 CDD:239732 43/196 (22%)
psmb4NP_001017801.1 proteasome_beta_type_4 3..198 CDD:239729 45/198 (23%)

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