DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R2 and psma5

DIOPT Version :9

Sequence 1:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_991271.1 Gene:psma5 / 403011 ZFINID:ZDB-GENE-040625-96 Length:241 Species:Danio rerio


Alignment Length:258 Identity:57/258 - (22%)
Similarity:101/258 - (39%) Gaps:52/258 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DRSPFLCGPSGFTFDNCLRNKQLKENGLEEPNSFTTGTTVVGIVFDGGVIIGAESRATSGGIVFS 77
            ||......|.|..|.        .|..:|   :...|:|.:||....||.:..|.|.|| .::..
Zfish     9 DRGVNTFSPEGRLFQ--------VEYAIE---AIKLGSTAIGIQTSEGVCLAVEKRITS-PLMEP 61

  Fly    78 KTCRKIIELQANIFAAGAGTARDTKALVELTRAQLELHRMNTGFRKVPVCCANQMIRQLLFRFNG 142
            .:..||:|:.::|..|.:|...|.|.|::..|.:.:.|.. |....:.|....|.:..|..:| |
Zfish    62 SSIEKIVEIDSHIGCAMSGLIADAKTLIDKARVETQNHWF-TYNETMTVESVTQAVSNLALQF-G 124

  Fly   143 NIDAD-----------MIIGGADNTGAHLFCTRSDGSTDTAPFTSIGSGYQVSMSILESRWSEDL 196
            ..|||           ::.||.|..|..|:.....|:.......:|||..:.:.|.|:..:.:.:
Zfish   125 EEDADPGAMSRPFGVALLFGGVDEKGPQLYHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSM 189

  Fly   197 SEESACALACDAVAAGMKNDLCSGGKVSLCVVRCDFSVQWPEQLPRQVPPTRTYRLSPKPGRT 259
            :.:       ||:            |.||.:::        :.:..::..|.....:.:||:|
Zfish   190 TLK-------DAI------------KSSLTILK--------QVMEEKLNATNIELATVEPGKT 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R2NP_649515.3 PRE1 9..228 CDD:223711 53/225 (24%)
proteasome_beta_type_7 50..239 CDD:239732 45/199 (23%)
psma5NP_991271.1 proteasome_alpha_type_5 8..220 CDD:239722 54/251 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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