DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R2 and Psma8

DIOPT Version :9

Sequence 1:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_001102354.1 Gene:Psma8 / 364814 RGDID:1311659 Length:250 Species:Rattus norvegicus


Alignment Length:231 Identity:55/231 - (23%)
Similarity:98/231 - (42%) Gaps:32/231 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DRSPFLCGPSGFTFDNCLRNKQLKENGLEEPNSFTTGTTVVGIVFDGGVIIGAESRATSGGIVFS 77
            ||:..:..|.|..|......:.:|:           |:|.|||.....|::|.|.::.: .:...
  Rat     6 DRAITVFSPDGHLFQVEYAQEAVKK-----------GSTAVGIRGTNIVVLGVEKKSVA-KLQDE 58

  Fly    78 KTCRKIIELQANIFAAGAGTARDTKALVELTRAQLELHRMNTGFRKVPVCCAN-----QMIRQLL 137
            :|.|||..|..::..|.||...|.:.::...|.:.:.|::..   :.||....     ..::|..
  Rat    59 RTVRKICALDDHVCMAFAGLTADARVVISRARVECQSHKLTV---EDPVTVEYITRFIATLKQKY 120

  Fly   138 FRFNG----NIDADMIIGGADNTGAHLFCTRSDGSTDTAPFTSIGSGYQVSMSILESRWSEDL-- 196
            .:.||    .|.| :|:|..|:....|:.|...|:.......:||...:.....||..::||.  
  Rat   121 TQSNGRRPFGISA-LIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIS 184

  Fly   197 SEESACALACDAVAAGMKNDLCSGGK-VSLCVVRCD 231
            ::..|..||..|:...::    |||| :.|.::|.|
  Rat   185 NDNEAIKLAIKALLEVVQ----SGGKNIELAIIRRD 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R2NP_649515.3 PRE1 9..228 CDD:223711 53/226 (23%)
proteasome_beta_type_7 50..239 CDD:239732 48/194 (25%)
Psma8NP_001102354.1 PRK03996 5..234 CDD:235192 55/231 (24%)
proteasome_alpha_type_7 5..213 CDD:239724 53/226 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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