DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta2R2 and Prosbeta4R1

DIOPT Version :9

Sequence 1:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster


Alignment Length:155 Identity:28/155 - (18%)
Similarity:61/155 - (39%) Gaps:5/155 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 TVVGIVFDGGVIIGAESRATSGGIVFSKTCRKIIELQANIFAAGAGTARDTKALVELTRAQLELH 115
            |::|:.....:|:.:::......:......||...:......:.||...|.....:.....::|:
  Fly     3 TILGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMSTAGDGGDCLKFSDFILRNMDLY 67

  Fly   116 RMNTGFRKVPVCCANQMIRQLL---FRFNGNIDADMIIGGADNT-GAHLFCTRSDGSTDTAPFTS 176
            ::..|: .:.|..|...||:.|   .:.:......:::||.|.| |..|......|::....:..
  Fly    68 KITNGY-DLTVRGAVHFIRRHLSAYLKSDCTFQVSLLVGGYDLTSGPELHYIDYLGNSVPVRYGG 131

  Fly   177 IGSGYQVSMSILESRWSEDLSEESA 201
            .|:.......|||..:..|:..::|
  Fly   132 HGAAMNFCTPILEEFYKPDMDTQAA 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R2NP_649515.3 PRE1 9..228 CDD:223711 28/155 (18%)
proteasome_beta_type_7 50..239 CDD:239732 28/155 (18%)
Prosbeta4R1NP_608698.2 PRE1 1..204 CDD:223711 28/155 (18%)
proteasome_beta_type_2 1..193 CDD:239727 28/155 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441134
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.