DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R2 and psmb8a

DIOPT Version :10

Sequence 1:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_571467.3 Gene:psmb8a / 30666 ZFINID:ZDB-GENE-990415-141 Length:271 Species:Danio rerio


Alignment Length:178 Identity:46/178 - (25%)
Similarity:87/178 - (48%) Gaps:2/178 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 GTTVVGIVFDGGVIIGAESRATSGGIVFSKTCRKIIELQANIFAAGAGTARDTKALVELTRAQLE 113
            |||.:...|..|||:..:|||::|..:.||...|:||:...:....:|:|.|.:....|...:..
Zfish    67 GTTTLAFKFRHGVIVAVDSRASAGKYIASKEANKVIEINPYLLGTMSGSAADCQYWERLLAKECR 131

  Fly   114 LHRMNTGFRKVPVCCANQMIRQLLFRFNG-NIDADMIIGGADNTGAHLFCTRSDGSTDTAPFTSI 177
            |:::... :::.|..|::::..::..:.| .:....:|.|.|..|..|:....:|:..:....|.
Zfish   132 LYKLRNK-QRISVSAASKLLSNMMLGYRGMGLSMGSMICGWDKQGPGLYYVDDNGTRLSGRMFST 195

  Fly   178 GSGYQVSMSILESRWSEDLSEESACALACDAVAAGMKNDLCSGGKVSL 225
            |.|...:..:::|.:.||::.|.|..|....:|.....|..|||.|:|
Zfish   196 GCGNSYAYGVVDSGYREDMTVEEAYELGRRGIAHATHRDAYSGGVVNL 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R2NP_649515.3 proteasome_beta_type_7 50..239 CDD:239732 45/177 (25%)
psmb8aNP_571467.3 proteasome_beta_type_5 68..255 CDD:239730 45/177 (25%)

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