DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R2 and Psmb5

DIOPT Version :9

Sequence 1:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_001099197.2 Gene:Psmb5 / 29425 RGDID:61879 Length:263 Species:Rattus norvegicus


Alignment Length:193 Identity:58/193 - (30%)
Similarity:96/193 - (49%) Gaps:3/193 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EEPN-SFTTGTTVVGIVFDGGVIIGAESRATSGGIVFSKTCRKIIELQANIFAAGAGTARDTKAL 104
            |||. ....|||.:...|..|||:.|:||||:|..:.|:|.:|:||:...:....||.|.|....
  Rat    50 EEPRIEMLHGTTTLAFKFQHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFW 114

  Fly   105 VELTRAQLELHRMNTGFRKVPVCCANQMIRQLLFRFNG-NIDADMIIGGADNTGAHLFCTRSDGS 168
            ..|...|..::.:... .::.|..|::::..:::::.| .:....:|.|.|..|..|:...|:|:
  Rat   115 ERLLARQCRIYELRNK-ERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 178

  Fly   169 TDTAPFTSIGSGYQVSMSILESRWSEDLSEESACALACDAVAAGMKNDLCSGGKVSLCVVRCD 231
            ..:....|:|||...:..:::..:|.||..|.|..||..|:......|..|||.|:|..||.|
  Rat   179 RISGTAFSVGSGSVYAFGVMDRGYSYDLQVEEAYDLARRAIYQATYRDAYSGGAVNLYHVRED 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R2NP_649515.3 PRE1 9..228 CDD:223711 55/188 (29%)
proteasome_beta_type_7 50..239 CDD:239732 54/183 (30%)
Psmb5NP_001099197.2 PTZ00488 29..263 CDD:185666 58/193 (30%)
proteasome_beta_type_5 60..247 CDD:239730 54/183 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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