DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R2 and Psmb5

DIOPT Version :10

Sequence 1:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_001099197.2 Gene:Psmb5 / 29425 RGDID:61879 Length:263 Species:Rattus norvegicus


Alignment Length:193 Identity:58/193 - (30%)
Similarity:96/193 - (49%) Gaps:3/193 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EEPN-SFTTGTTVVGIVFDGGVIIGAESRATSGGIVFSKTCRKIIELQANIFAAGAGTARDTKAL 104
            |||. ....|||.:...|..|||:.|:||||:|..:.|:|.:|:||:...:....||.|.|....
  Rat    50 EEPRIEMLHGTTTLAFKFQHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFW 114

  Fly   105 VELTRAQLELHRMNTGFRKVPVCCANQMIRQLLFRFNG-NIDADMIIGGADNTGAHLFCTRSDGS 168
            ..|...|..::.:... .::.|..|::::..:::::.| .:....:|.|.|..|..|:...|:|:
  Rat   115 ERLLARQCRIYELRNK-ERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 178

  Fly   169 TDTAPFTSIGSGYQVSMSILESRWSEDLSEESACALACDAVAAGMKNDLCSGGKVSLCVVRCD 231
            ..:....|:|||...:..:::..:|.||..|.|..||..|:......|..|||.|:|..||.|
  Rat   179 RISGTAFSVGSGSVYAFGVMDRGYSYDLQVEEAYDLARRAIYQATYRDAYSGGAVNLYHVRED 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R2NP_649515.3 proteasome_beta_type_7 50..239 CDD:239732 54/183 (30%)
Psmb5NP_001099197.2 proteasome_beta_type_5 60..247 CDD:239730 54/183 (30%)

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