DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R2 and Psmb11

DIOPT Version :9

Sequence 1:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_001381580.1 Gene:Psmb11 / 290206 RGDID:1308773 Length:301 Species:Rattus norvegicus


Alignment Length:258 Identity:67/258 - (25%)
Similarity:108/258 - (41%) Gaps:30/258 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 EPNSF--------TTGTTVVGIVFDGGVIIGAESRATSGGIVFSKTCRKIIELQANIFAAGAGTA 98
            :|.:|        ..|||.:...|..|||..|::|::.|..|.....||:|.:..::....:||:
  Rat    34 DPQTFLQIYGPRLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASRKVIPVHRHLLGTTSGTS 98

  Fly    99 RDTKALVELTRAQLELHRMNTGFRKVP-VCCANQMIRQLLFRFNGNIDADMIIG----GADNTGA 158
            .|......:.|.:|.|..:..|  ::| |....:::..::.|:.|   .|:.:.    |.|::|.
  Rat    99 ADCATWYRVLRRELRLRELREG--QLPSVAGTAKLLSAMMSRYRG---LDLCVATALCGWDHSGP 158

  Fly   159 HLFCTRSDGSTDTAPFTSIGSGYQVSMSILESRWSEDLSEESACALACDAVAAGMKNDLCSGGKV 223
            .||...|||:.......|:|||...:..:|:..:..|::.:.|..||..|||.....|..|||.|
  Rat   159 ALFYVYSDGTCLQGDVFSVGSGSPYAYGVLDRSYHYDMTVQEAYTLARCAVAHATHRDAYSGGSV 223

  Fly   224 SLCVVRCDFSVQWPEQLPRQVPPTRTYRLSPKPGRTTILSTLVHPVLSWRGALALPEPGGSQE 286
            .|..||   ...| |.:.|.........|....|        ....|..:.:..||||...|:
  Rat   224 DLFHVR---ESGW-EYISRSDACVLYRELQEAQG--------FEQELEAKASEVLPEPATPQD 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R2NP_649515.3 PRE1 9..228 CDD:223711 54/198 (27%)
proteasome_beta_type_7 50..239 CDD:239732 54/193 (28%)
Psmb11NP_001381580.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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