DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R2 and Psma6

DIOPT Version :9

Sequence 1:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_036098.1 Gene:Psma6 / 26443 MGIID:1347006 Length:246 Species:Mus musculus


Alignment Length:233 Identity:44/233 - (18%)
Similarity:84/233 - (36%) Gaps:40/233 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DRSPFLCGPSGFTFDNCLRNKQLKENGLEEPNSFTTGTTVVGIVFDGGVIIGAESRATSGGIVFS 77
            ||...:..|.|..:......|.:.:.||       |...|.|  .|..||:  ..:.....::.|
Mouse    10 DRHITIFSPEGRLYQVEYAFKAINQGGL-------TSVAVRG--KDCAVIV--TQKKVPDKLLDS 63

  Fly    78 KTCRKIIELQANIFAAGAGTARDTKALVELTRAQLELHRMNTGFRKVPVCCANQMIRQLLFRFNG 142
            .|...:.::..:|.....|...|:::.|:..|.:....:...|: ::||....:.|..:...:..
Mouse    64 STVTHLFKITESIGCVMTGMTADSRSQVQRARYEAANWKYKYGY-EIPVDMLCKRIADISQVYTQ 127

  Fly   143 NIDADM--------IIGGADNTGAHLFCTRSDGSTDTAPF------TSIGSGYQVSMSILESR-- 191
            |  |:|        :||..:..|..::      ..|.|.:      |:.|.....|.|.||.:  
Mouse   128 N--AEMRPLGCCMILIGIDEEQGPQVY------KCDPAGYYCGFKATAAGVKQTESTSFLEKKVK 184

  Fly   192 ----WSEDLSEESACALACDAVAAGMKNDLCSGGKVSL 225
                |:.:.:.|:|.......::...|......|.|::
Mouse   185 KKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTV 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R2NP_649515.3 PRE1 9..228 CDD:223711 44/233 (19%)
proteasome_beta_type_7 50..239 CDD:239732 36/196 (18%)
Psma6NP_036098.1 proteasome_alpha_type_6 8..220 CDD:239723 43/229 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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