DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta2R2 and Psmb9

DIOPT Version :10

Sequence 1:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_036840.2 Gene:Psmb9 / 24967 RGDID:3427 Length:219 Species:Rattus norvegicus


Alignment Length:199 Identity:53/199 - (26%)
Similarity:101/199 - (50%) Gaps:6/199 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 TGTTVVGIVFDGGVIIGAESRATSGGIVFSKTCRKIIELQANIFAAGAGTARDTKALVELTRAQL 112
            ||||::.:.|||||::|::||.::|..|.::...|:..|...|:.|.:|:|.|.:|:.::...||
  Rat    19 TGTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIYCALSGSAADAQAIADMAAYQL 83

  Fly   113 ELHRMNTGFRKVPVCCANQMIRQLLFRFNGNIDADMIIGGAD-NTGAHLFCTRSDGSTDTAPFTS 176
            |||.:......:.:..|| :::.:.:::..::.|.:::.|.| ..|..::.|.. |.....||..
  Rat    84 ELHGLELEEPPLVLAAAN-IVKNISYKYREDLLAHLMVAGWDQREGGQVYGTMG-GMLIRQPFAI 146

  Fly   177 IGSGYQVSMSILESRWSEDLSEESACALACDAVAAGMKNDLCSGGKVSLCVVRC---DFSVQWPE 238
            .|||.......:::.:...::.|.......||:...|..|..|||.:.|..:..   |..|...:
  Rat   147 GGSGSTYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRDGSSGGVIYLVTITADGVDHRVILGD 211

  Fly   239 QLPR 242
            :||:
  Rat   212 ELPK 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R2NP_649515.3 proteasome_beta_type_7 50..239 CDD:239732 49/192 (26%)
Psmb9NP_036840.2 proteasome_beta_type_6 21..207 CDD:239731 48/187 (26%)

Return to query results.
Submit another query.