DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R2 and pas-6

DIOPT Version :9

Sequence 1:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_504472.1 Gene:pas-6 / 178943 WormBaseID:WBGene00003927 Length:260 Species:Caenorhabditis elegans


Alignment Length:289 Identity:54/289 - (18%)
Similarity:87/289 - (30%) Gaps:102/289 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 GTTVVGIVFDGGVIIGAESRATSGGIVFSKTCRKIIELQANIFAAGAGTARDTKALVELTRAQLE 113
            |:..|||..:...:|.|..||.:.   .|...:|:.|:..:...:.||...|.:.|....:.:..
 Worm    32 GSATVGIKSETHAVIVALKRAQND---LSSHQKKVYEIDTHAGVSIAGLLSDGRILARYLQTECS 93

  Fly   114 LHRMNTGFRKVPVCCANQMIRQLLFRFNGN--------IDADMIIGGADNTGAHLFCTRSDGSTD 170
            ..|.:.. :.||:   .::...:..:...|        ....::|.|.|..|||:..|.......
 Worm    94 SWRWDYK-QAVPI---KKLAESMQLKLQANTQYYGRRPFGVGILIAGYDKDGAHIIQTDPSAEVV 154

  Fly   171 TAPFTSIGSGYQVSMSILESRWSEDLSEESACALACDAVAAGMKNDLCSGGKVSLCVVRCDFSVQ 235
            :...||||:..|.:.:.||.  :.|..|:|.                                  
 Worm   155 SMHGTSIGARSQSARTYLER--NVDNFEKST---------------------------------- 183

  Fly   236 WPEQLPRQVPPTRTYRLSPKPGRTTILSTLVHPVLSWRGALALPEPGGSQEPGRG---------- 290
             ||||                        :||.:|:.|..|...|...:|....|          
 Worm   184 -PEQL------------------------IVHALLALRDTLPAEENLNAQNTSIGIVGKDSPFSL 223

  Fly   291 ----------------PGTSGAARGQEAP 303
                            |.|:|.|....||
 Worm   224 LEDAQVAVHLNQVSTHPRTTGGAAAAAAP 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R2NP_649515.3 PRE1 9..228 CDD:223711 36/186 (19%)
proteasome_beta_type_7 50..239 CDD:239732 36/196 (18%)
pas-6NP_504472.1 PRE1 4..237 CDD:223711 48/272 (18%)
proteasome_alpha_type_1 6..216 CDD:239718 48/251 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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