DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta2R2 and pas-7

DIOPT Version :10

Sequence 1:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_496177.2 Gene:pas-7 / 174571 WormBaseID:WBGene00003928 Length:250 Species:Caenorhabditis elegans


Alignment Length:121 Identity:24/121 - (19%)
Similarity:39/121 - (32%) Gaps:31/121 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 VCCANQMIRQLLFRFNGNIDADMIIGGADNTGAHLFCTRSDGSTDTAPFTSIGSGYQVSMSILES 190
            |..|:::|...|:..|.|   ..:....||.|..:.....||      |......|..:|     
 Worm    47 VVVADKLISSKLYTDNAN---PRMFNVNDNVGVAVAGNYPDG------FALKNYAYGEAM----- 97

  Fly   191 RWSEDLSEESACALACDAVA-------AGMKNDLCSGGKVSLCVVRCDFSVQWPEQ 239
            :|.:|..|........::||       .|:.....:|.          |.:.|.:|
 Worm    98 KWLKDYREPMPIQNIANSVAEYIHIHTLGISRPFGAGA----------FFMSWNKQ 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R2NP_649515.3 proteasome_beta_type_7 50..239 CDD:239732 23/119 (19%)
pas-7NP_496177.2 proteasome_alpha_type_3 5..216 CDD:239720 24/121 (20%)

Return to query results.
Submit another query.