DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R2 and pbs-5

DIOPT Version :9

Sequence 1:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_493558.1 Gene:pbs-5 / 173334 WormBaseID:WBGene00003951 Length:284 Species:Caenorhabditis elegans


Alignment Length:275 Identity:61/275 - (22%)
Similarity:105/275 - (38%) Gaps:60/275 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GFTFDNCLRNK----QLKENGLEEP-------------------------------NSFTTGTTV 52
            |.|||:...::    ..|:|.:.||                               ..|..|||.
 Worm     3 GETFDDFENDEGEMAMAKQNLIAEPARADFTFAKLPLGIQPVDFMKTHFAETAGKSMQFRKGTTT 67

  Fly    53 VGIVFD-------GGVIIGAESRATSGGIVFSKTCRKIIELQANIFAAGAGTARDTKALVELTRA 110
            :..|::       ||:|:..:|||:||..:.||:..||:::...:.|..||.|.|.:....:...
 Worm    68 LAFVYEPATPADKGGIIVAVDSRASSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAK 132

  Fly   111 QLELHRMNTGFRKVPVCCANQMIRQLLFRFNG-NIDADMIIGGADNTGAHLFCTRSDGSTDTAPF 174
            ...|:.:... ..:.|..|::.....|:.:.| .:....::.|.|..|..:|...|:|.......
 Worm   133 YCTLYELREK-TSITVSAASKYFANTLYGYRGQGLSVGSMVAGYDKKGPQIFKVDSEGDRCQLKV 196

  Fly   175 TSIGSGYQVSMSILESRWSEDLSEESACALACDAVAAGMKNDLCSGGKVSLCVVRCDFSVQWPEQ 239
            .|:|||...:..||::.:...::::.|..|...|:......|..|||..:||             
 Worm   197 CSVGSGSLNAYGILDNHYKPKMTDDEARKLGLRAIMHATYRDSGSGGVCNLC------------- 248

  Fly   240 LPRQVPPTRTYRLSP 254
               .:.||...||.|
 Worm   249 ---HITPTEKIRLPP 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R2NP_649515.3 PRE1 9..228 CDD:223711 56/247 (23%)
proteasome_beta_type_7 50..239 CDD:239732 46/196 (23%)
pbs-5NP_493558.1 Ntn_hydrolase 65..252 CDD:320988 46/203 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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