DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R2 and pas-5

DIOPT Version :10

Sequence 1:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_492765.1 Gene:pas-5 / 172942 WormBaseID:WBGene00003926 Length:248 Species:Caenorhabditis elegans


Alignment Length:194 Identity:51/194 - (26%)
Similarity:87/194 - (44%) Gaps:20/194 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 GTTVVGIVFDGGVIIGAESRATSGGIVFSKTCRKIIELQANIFAAGAGTARDTKALVELTRAQLE 113
            |:|.:||....||::.||.|:|| .::.:....||.::..:|....||...|::.|||  |||:|
 Worm    34 GSTSIGIKTSEGVLLAAEKRSTS-KLMVNDAIEKISKVDQHIGVTFAGLIADSRTLVE--RAQIE 95

  Fly   114 LHRMNTGF---RKVPVCCANQMIRQLLFRFNGNIDAD----------MIIGGADNTGAHLFCTRS 165
              ..|..|   ||:.|....|.:..|..:| |:.|..          |:..|.|..||.||....
 Worm    96 --AQNFWFTYNRKIRVEDVTQSVANLALQF-GDDDVKASMSRPFGVAMLFAGVDQEGAKLFHLDP 157

  Fly   166 DGSTDTAPFTSIGSGYQVSMSILESRWSEDLSEESACALACDAVAAGMKNDLCSGGKVSLCVVR 229
            .|:.......|||:....:...|:.::.:.|:.:....:|. |:...:..:..:...|.:.|::
 Worm   158 SGTFIDCKAKSIGAASDGAEQNLKEQYHDALTIKEGLKMAL-AILKQVMEEKLNSANVEVVVIK 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R2NP_649515.3 proteasome_beta_type_7 50..239 CDD:239732 50/193 (26%)
pas-5NP_492765.1 proteasome_alpha_type_5 8..219 CDD:239722 50/191 (26%)

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