DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R2 and Psmb8

DIOPT Version :10

Sequence 1:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_034854.2 Gene:Psmb8 / 16913 MGIID:1346527 Length:276 Species:Mus musculus


Alignment Length:224 Identity:59/224 - (26%)
Similarity:102/224 - (45%) Gaps:9/224 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PTLMKYPDRSPFLCGPSGFTFDNCLRNKQLKENGLEEPN---SFTTGTTVVGIVFDGGVIIGAES 67
            |....:..::|.|..|.|......||:    ..|.:|.|   ....|||.:...|..|||:..:|
Mouse    30 PGHYSFSAQAPELALPRGMQPTAFLRS----FGGDQERNVQIEMAHGTTTLAFKFQHGVIVAVDS 90

  Fly    68 RATSGGIVFSKTCRKIIELQANIFAAGAGTARDTKALVELTRAQLELHRMNTGFRKVPVCCANQM 132
            |||:|..:.|....|:||:...:....:|.|.|.:....|...:..|:.:..| .::.|..|:::
Mouse    91 RATAGSYISSLRMNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNG-ERISVSAASKL 154

  Fly   133 IRQLLFRFNG-NIDADMIIGGADNTGAHLFCTRSDGSTDTAPFTSIGSGYQVSMSILESRWSEDL 196
            :..::.::.| .:....:|.|.|..|..|:....:|:..:....|.|||...:..:::|.:.:||
Mouse   155 LSNMMLQYRGMGLSMGSMICGWDKKGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDL 219

  Fly   197 SEESACALACDAVAAGMKNDLCSGGKVSL 225
            |.|.|..|...|:|.....|..|||.|::
Mouse   220 SPEEAYDLGRRAIAYATHRDNYSGGVVNM 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R2NP_649515.3 proteasome_beta_type_7 50..239 CDD:239732 48/177 (27%)
Psmb8NP_034854.2 proteasome_beta_type_5 73..260 CDD:239730 48/177 (27%)

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