DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr16 and paplna

DIOPT Version :9

Sequence 1:NP_001287169.1 Gene:dpr16 / 40619 FlyBaseID:FBgn0037295 Length:488 Species:Drosophila melanogaster
Sequence 2:XP_005169942.1 Gene:paplna / 562930 ZFINID:ZDB-GENE-070815-4 Length:1187 Species:Danio rerio


Alignment Length:345 Identity:76/345 - (22%)
Similarity:120/345 - (34%) Gaps:127/345 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 LAKERELLPRRQLSLPPLNATVQAGQHAYLPCKLNQHSGK--------PLS-----W---VRLRD 237
            |..:|.:||.| ::.||.:|.:...:...:|....:|..:        |::     |   |..||
Zfish   845 LVGQRVVLPCR-VTPPPSSAVLVEWRRDGVPVDPTRHEQQLDGSLLVGPITLQDSGWFLCVATRD 908

  Fly   238 EHIIAVDHTTFI--------NDARFASLLQSTTLTT------------LVSGGA-----LSTTAT 277
            :   ..||....        |:|..:.:..|.:.|:            ||...|     |..:..
Zfish   909 D---KRDHRYIYLSVSGSSQNNAGISEVDSSQSYTSQSSSRFNIDYSPLVEARAGQTAKLQCSVL 970

  Fly   278 PVAALGNSFAHAVPGGQERG---NSSSLSWTLQIKYVNLEDAGWYECQLATEPKMSAK-VQLFVI 338
            ||:|:.....|....||...   :|.....||.||.:..:|:|.|.|.:....|...: |||   
Zfish   971 PVSAIHAVTIHWSRAGQPLNSLRHSQHSDGTLVIKQLTADDSGLYTCTVTDAQKFEERQVQL--- 1032

  Fly   339 TPRTELIGDRQRFVKA--------GSRVELHCIVRGTLEAPKYIFWYRGDQQVTAENEASGAQSG 395
                .::|| .|..||        ||..:|.|:                   ||.||    ...|
Zfish  1033 ----RVLGD-LRITKAPIDVDVVQGSTAQLACV-------------------VTGEN----VNVG 1069

  Fly   396 WYTQIDRNIFGSTEHNRNTI--------------GSLVIPLVRKIHSGNYTCEPEN-----SAAA 441
            |              :||.:              |:|::..|:.:..|.|||....     ||||
Zfish  1070 W--------------SRNGVPVRPDGHRVHVSADGTLILNNVQSVDEGTYTCNAYTGTLSVSAAA 1120

  Fly   442 SMQL------HVLSGEYSAS 455
            .::|      .:..|::|:|
Zfish  1121 EIRLAKTPQQDIDGGQFSSS 1140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr16NP_001287169.1 IG_like 205..337 CDD:214653 38/176 (22%)
Ig <298..338 CDD:299845 13/40 (33%)
IG_like 352..447 CDD:214653 26/127 (20%)
Ig 358..439 CDD:143165 17/99 (17%)
paplnaXP_005169942.1 TSP1 24..75 CDD:214559
ADAM_spacer1 181..293 CDD:310520
TSP1 303..356 CDD:214559
TSP1 388..442 CDD:214559
TSP1 449..498 CDD:214559
TSP1 504..557 CDD:214559
KU 720..771 CDD:238057
Ig_3 839..906 CDD:316449 13/61 (21%)
IGc2 960..1022 CDD:197706 16/61 (26%)
I-set 1039..1121 CDD:333254 25/118 (21%)
PLAC 1142..1173 CDD:312271
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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