DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr16 and lrit3a

DIOPT Version :9

Sequence 1:NP_001287169.1 Gene:dpr16 / 40619 FlyBaseID:FBgn0037295 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001122166.1 Gene:lrit3a / 558559 ZFINID:ZDB-GENE-080723-63 Length:636 Species:Danio rerio


Alignment Length:302 Identity:59/302 - (19%)
Similarity:92/302 - (30%) Gaps:109/302 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 PLNATVQAGQHAYLPCKLNQ-HSGKPLSWVRLRDEHIIAVDHTTFINDARFASLLQSTTLTTL-- 266
            |..|.....:..||....|. .|..|.|:..|:..|.:.:| ...|....:.||.:..:|.||  
Zfish    73 PTEAFYYLSELRYLWITYNSITSVDPGSFYNLKVLHELRLD-GNMIATFPWESLKEMPSLKTLDL 136

  Fly   267 -----------------------VSGGALSTTATPVAALGNSFAHAVPGGQERGNSSSLSWTLQI 308
                                   :|...|:|..:.:..:...|:    |.|...|:|      |.
Zfish   137 HNNRLTSVPVEAAPYLINITYLDISSNKLTTLPSDLVDIWPPFS----GIQPSANTS------QK 191

  Fly   309 KYVNLEDAGWY-ECQLATEPKMSAKVQLFVIT------------------PRTELIGDRQRFVK- 353
            ..:.|:|..|| :|:::...::|....:.|:.                  .|.||    .:.|| 
Zfish   192 TVLGLQDNPWYCDCRISKLIELSKMAGIPVVLMDQVLTCSGPEHLSGVLFQRAEL----DQCVKP 252

  Fly   354 ------------AGSRVELHCIVRGTLEAPKYIFWYRGDQQV---TAENEASGAQSGWYTQIDRN 403
                        .||.|.|.|...| ...|. :.|...|..|   |...|:.|....|       
Zfish   253 TVMTSATKITSPLGSNVLLRCDANG-FPTPT-LLWTTADGSVVNNTVVQESPGEGVRW------- 308

  Fly   404 IFGSTEHNRNTIGSLVIPLVRKIHS------GNYTCEPENSA 439
                              .:..:||      |:|.|:.:|.|
Zfish   309 ------------------SILSLHSIVFKDAGDYRCKAKNVA 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr16NP_001287169.1 IG_like 205..337 CDD:214653 32/158 (20%)
Ig <298..338 CDD:299845 9/40 (23%)
IG_like 352..447 CDD:214653 23/110 (21%)
Ig 358..439 CDD:143165 18/89 (20%)
lrit3aNP_001122166.1 LRR_8 81..141 CDD:290566 15/60 (25%)
leucine-rich repeat 83..106 CDD:275378 7/22 (32%)
LRR_4 107..145 CDD:289563 8/38 (21%)
leucine-rich repeat 107..130 CDD:275378 5/23 (22%)
LRR_8 129..>171 CDD:290566 6/41 (15%)
LRR_4 129..170 CDD:289563 6/40 (15%)
leucine-rich repeat 131..154 CDD:275378 3/22 (14%)
leucine-rich repeat 155..168 CDD:275378 2/12 (17%)
TPKR_C2 199..249 CDD:301599 8/53 (15%)
Ig 252..343 CDD:299845 21/108 (19%)
IG_like 261..343 CDD:214653 21/99 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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