DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr16 and LSAMP

DIOPT Version :10

Sequence 1:NP_001287169.1 Gene:dpr16 / 40619 FlyBaseID:FBgn0037295 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001305844.1 Gene:LSAMP / 4045 HGNCID:6705 Length:361 Species:Homo sapiens


Alignment Length:380 Identity:80/380 - (21%)
Similarity:119/380 - (31%) Gaps:143/380 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 LRREKELAKERELLPRRQLSLPPL--------------NATVQAGQHAYLPCKLNQHSGKPLSWV 233
            :||.:...|:..|:..|.|.|.|.              |.||:.|..|.|.|.:...:.| ::| 
Human     2 VRRVQPDRKQLPLVLLRLLCLLPTGLPVRSVDFNRGTDNITVRQGDTAILRCVVEDKNSK-VAW- 64

  Fly   234 RLRDEHIIAVDHTTFINDARFASLLQSTTLTTLVSGGALSTTATPVAALGNSFAHAVPGGQERGN 298
             |....||...|..:..|.|.                                        |...
Human    65 -LNRSGIIFAGHDKWSLDPRV----------------------------------------ELEK 88

  Fly   299 SSSLSWTLQIKYVNLEDAGWYECQLAT--EPKMSAKVQLFVITPRTELIGDRQRFVKAGSRVELH 361
            ..||.::|:|:.|::.|.|.|.|.:.|  |||.|....:..:.|:...|.. ...|..||.|.|.
Human    89 RHSLEYSLRIQKVDVYDEGSYTCSVQTQHEPKTSQVYLIVQVPPKISNISS-DVTVNEGSNVTLV 152

  Fly   362 CIVRGTLEAPKYIFW---------YRGDQQ------VTAE------------------------- 386
            |:..|..|  ..|.|         :.|:::      :|.|                         
Human   153 CMANGRPE--PVITWRHLTPTGREFEGEEEYLEILGITREQSGKYECKAANEVSSADVKQVKVTV 215

  Fly   387 -----------NEA-SGAQSG--------------WYTQIDRNIFGSTEHNRNTIG--SLVIPLV 423
                       ||| :|.|:.              ||....|....:....::|.|  ||.:..|
Human   216 NYPPTITESKSNEATTGRQASLKCEASAVPAPDFEWYRDDTRINSANGLEIKSTEGQSSLTVTNV 280

  Fly   424 RKIHSGNYTCEPENSAAASMQLHVLSGEYSASAI---KSTAARPHRLGHGYTSLH 475
            .:.|.|||||...|..          |..:||.:   :.....||.:....|::|
Human   281 TEEHYGNYTCVAANKL----------GVTNASLVLFKRVLPTIPHPIQEIGTTVH 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr16NP_001287169.1 IG_like 352..447 CDD:214653 33/162 (20%)
Ig strand B 358..362 CDD:409353 2/3 (67%)
Ig strand C 373..377 CDD:409353 2/12 (17%)
Ig strand E 416..420 CDD:409353 3/5 (60%)
Ig strand F 430..435 CDD:409353 4/4 (100%)
LSAMPNP_001305844.1 Ig 38..128 CDD:472250 30/132 (23%)
Ig strand B 49..53 CDD:409353 2/3 (67%)
Ig strand C 61..65 CDD:409353 2/6 (33%)
Ig strand E 94..98 CDD:409353 1/3 (33%)
Ig strand F 108..113 CDD:409353 2/4 (50%)
Ig strand G 121..124 CDD:409353 1/2 (50%)
Ig_3 131..201 CDD:464046 15/72 (21%)
Ig_3 218..294 CDD:464046 19/75 (25%)

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