DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr16 and Cadm2

DIOPT Version :9

Sequence 1:NP_001287169.1 Gene:dpr16 / 40619 FlyBaseID:FBgn0037295 Length:488 Species:Drosophila melanogaster
Sequence 2:XP_038944379.1 Gene:Cadm2 / 360687 RGDID:1305678 Length:444 Species:Rattus norvegicus


Alignment Length:275 Identity:60/275 - (21%)
Similarity:95/275 - (34%) Gaps:85/275 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 PL--NATVQAGQHAYLPCKLNQHSGKPLSWVRLRDEHIIAVDHTTFINDARFASLLQSTTLTTLV 267
            ||  |.||..|..|.|.|:::|:....|.|..       ....|.:.:|.:              
  Rat    36 PLTQNVTVVEGGTAILTCRVDQNDNTSLQWSN-------PAQQTLYFDDKK-------------- 79

  Fly   268 SGGALSTTATPVAALGNSFAHAVPGGQERGNSSSL---SW---TLQIKYVNLEDAGWYECQLATE 326
                         ||             |.|...|   ||   ::.:..|:|.|.|.|.|.|.|.
  Rat    80 -------------AL-------------RDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFTM 118

  Fly   327 PKMSAKVQLFVI-TPRTELIGDRQRFVKAGSRVELHCIVRGTLEAPKYIFWYRGDQQV-----TA 385
            |..::|..|.|: .|....|......|..|..::|.|...|:..|.. |.|::.|:::     ..
  Rat   119 PVKTSKAYLTVLGVPEKPQISGFSSPVMEGDLMQLTCKTSGSKPAAD-IRWFKNDKEIKDVKYLK 182

  Fly   386 ENEASGAQSGWYTQIDRNIFGSTEHNRNTIGSLVIPLVRKIHSGNYTCEPEN---SAAASMQLHV 447
            |.:|:.......:.:|..:      :|:..|..||            |..::   :|...:.:.|
  Rat   183 EEDANRKTFTVSSTLDFRV------DRSDDGVAVI------------CRVDHESLNATPQVAMQV 229

  Fly   448 LSGEYSASA--IKST 460
            |...|:.|.  |.||
  Rat   230 LEIHYTPSVKIIPST 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr16NP_001287169.1 IG_like 205..337 CDD:214653 32/139 (23%)
Ig <298..338 CDD:299845 15/45 (33%)
IG_like 352..447 CDD:214653 18/102 (18%)
Ig 358..439 CDD:143165 15/88 (17%)
Cadm2XP_038944379.1 IgV_1_Necl-3 35..130 CDD:409498 32/140 (23%)
Ig strand B 49..53 CDD:409498 2/3 (67%)
Ig strand C 62..66 CDD:409498 1/3 (33%)
Ig strand E 96..100 CDD:409498 0/3 (0%)
Ig strand F 110..115 CDD:409498 2/4 (50%)
Ig strand G 122..125 CDD:409498 0/2 (0%)
IgI_2_Necl-3 129..232 CDD:409467 23/121 (19%)
Ig strand B 151..155 CDD:409467 1/3 (33%)
Ig strand C 165..169 CDD:409467 1/4 (25%)
Ig strand E 195..199 CDD:409467 0/3 (0%)
Ig strand F 209..214 CDD:409467 3/16 (19%)
Ig strand G 225..228 CDD:409467 0/2 (0%)
IGc2 249..312 CDD:197706
Ig strand B 251..260 CDD:409353
Ig strand C 266..272 CDD:409353
Ig strand C' 275..278 CDD:409353
Ig strand D 281..286 CDD:409353
Ig strand E 287..294 CDD:409353
Ig strand F 301..309 CDD:409353
Ig strand G 312..322 CDD:409353
4.1m 397..415 CDD:128590
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I5126
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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