DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr16 and dpr3

DIOPT Version :9

Sequence 1:NP_001287169.1 Gene:dpr16 / 40619 FlyBaseID:FBgn0037295 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001014459.2 Gene:dpr3 / 3346208 FlyBaseID:FBgn0053516 Length:522 Species:Drosophila melanogaster


Alignment Length:542 Identity:137/542 - (25%)
Similarity:207/542 - (38%) Gaps:155/542 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GILAGSG---------RSPG-TASILLAFLAAVSFRGMRAPLAATATPMENASLIASPATGTSTM 80
            |.|..||         |||| .|.:.:|..||    |....:||||.    |:..|:.....:|.
  Fly    46 GFLRRSGADDVDVIEPRSPGHAADVDVAAAAA----GATTSVAATAA----AAAAATTRAAATTR 102

  Fly    81 GSAGSPVLMLGDDQQQQE--------------YDTTVVDSWSDRPDTATLTKGFSIPSYLPPFPE 131
            .......|::...||||:              ..|...|...|.|..:|........|..||   
  Fly   103 AVIIIMALVVSIMQQQQQSLLWPFCNGLAAAAASTGQPDDSGDGPTLSTFLSSSQSQSPSPP--- 164

  Fly   132 FIPADLPHMLRNASSGAAPPADIGPSGSPMPSKPNEQSRLH----------AYDSEQKAQ-QLRR 185
                       .||:.|:.|:..  |...:...|..::..|          ::.|:..|| ..:|
  Fly   165 -----------AASASASSPSSF--SSFAVAHGPQTEATNHTFKSLAFLDASFGSDLFAQTDAKR 216

  Fly   186 EKELAKERELLPR-RQLSLP------PLNATVQAGQ-HAYLPCKLNQHSGKPLSWVRLRDEHIIA 242
            |:..|.:.|.... ...|||      |.|.|.:.|. .|.:.|:::....|.:||:|.||.||:.
  Fly   217 ERSGAADEESQDADTSQSLPIFDFGMPRNITGRTGHTEAIIKCRVDSLHDKSVSWIRKRDLHILT 281

  Fly   243 VDHTTFINDARFASLLQSTTLTTLVSGGALSTTATPVAALGNSFAHAVPGGQERGNSSSLSWTLQ 307
            |...|:.:|.||                                       |...:..|..|||.
  Fly   282 VGTATYTSDKRF---------------------------------------QVTESKDSREWTLH 307

  Fly   308 IKYVNLEDAGWYECQLATEPKMSAKVQLFV--ITPRTELI--GDRQRFVKAGSRVELHCIVRGTL 368
            :|....:|:|.||||:.||||||...||.:  |:|..:.:  |......||||.:.|:|:|    
  Fly   308 VKAPLAKDSGIYECQVNTEPKMSMAFQLNIIEISPDAKAVISGPPDLHFKAGSAIILNCLV---- 368

  Fly   369 EAPKY-----IFWYRGDQQVTAENEASG-----AQSGWYTQ--------------IDRNI----- 404
            :.|..     |:||||:..:|..:...|     |..|.:.|              :|..:     
  Fly   369 QQPSVKDIGPIYWYRGEHMITPFDADDGQPEIPAGRGEHPQGIPEDTSPNDIMSEVDLQMEFATR 433

  Fly   405 ------FGSTEHNRNTIGSLVIPLVRKIHSGNYTCEPENSAAASMQLHVLSGEYSASAIKSTAAR 463
                  .|.|..:|     |.|...:...:|||||:|..:::||:.:||::.| :.:|::.:.|.
  Fly   434 IAMESQLGDTLKSR-----LRISNAQTTDTGNYTCQPTTASSASVLVHVINDE-NPAAMQKSGAC 492

  Fly   464 PHRLGHGYTSLHQWLIFLLVAL 485
            |..||.....||..|:..|:.|
  Fly   493 PCALGPLQLLLHLLLLPELLLL 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr16NP_001287169.1 IG_like 205..337 CDD:214653 39/132 (30%)
Ig <298..338 CDD:299845 19/41 (46%)
IG_like 352..447 CDD:214653 32/129 (25%)
Ig 358..439 CDD:143165 26/115 (23%)
dpr3NP_001014459.2 Ig 243..330 CDD:299845 35/125 (28%)
IG_like 243..329 CDD:214653 34/124 (27%)
Ig 350..464 CDD:299845 29/122 (24%)
IG_like <441..477 CDD:214653 13/40 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444690
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 82 1.000 Inparanoid score I5030
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1457433at2759
OrthoFinder 1 1.000 - - FOG0000207
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23279
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.900

Return to query results.
Submit another query.