DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr16 and Opcml

DIOPT Version :9

Sequence 1:NP_001287169.1 Gene:dpr16 / 40619 FlyBaseID:FBgn0037295 Length:488 Species:Drosophila melanogaster
Sequence 2:XP_006510497.1 Gene:Opcml / 330908 MGIID:97397 Length:354 Species:Mus musculus


Alignment Length:259 Identity:57/259 - (22%)
Similarity:96/259 - (37%) Gaps:65/259 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 NATVQAGQHAYLPCKLNQHSGKPLSWVRLRDEHIIAVDHTTFINDARFASLLQSTTLTTLVSGGA 271
            |.||:.|:.|.|.|.::....: ::|  |....|:...:..:..|.|...|:.:.|         
Mouse    44 NVTVRQGESATLRCTIDDRVTR-VAW--LNRSTILYAGNDKWSIDPRVIILVNTPT--------- 96

  Fly   272 LSTTATPVAALGNSFAHAVPGGQERGNSSSLSWTLQIKYVNLEDAGWYECQLATE--PKMSAKVQ 334
                                           .:::.|:.|::.|.|.|.|.:.|:  ||.| :|.
Mouse    97 -------------------------------QYSIMIQNVDVYDEGPYTCSVQTDNHPKTS-RVH 129

  Fly   335 LFVITPRTELIGDRQRFVKAGSRVELHCIVRGTLEAPKYIFW----YRGDQQVTAENEASGAQSG 395
            |.|..|...:.......|..||.|.|.|:..|..|..  :.|    .:..|...:|:|       
Mouse   130 LIVQVPPQIMNISSDITVNEGSSVTLLCLAIGRPEPT--VTWRHLSVKEGQGFVSEDE------- 185

  Fly   396 WYTQI-DRNIFGSTEHNRNTIGSLVIPLVRK----IHSGNYTCEPENSAAASMQLHVLSGEYSA 454
             |.:| |.....|.|:..:.:..:..|.|||    ::...|..:.:|:..:..|..:||.|.||
Mouse   186 -YLEISDIKRDQSGEYECSALNDVAAPDVRKVKITVNYPPYISKAKNTGVSVGQKGILSCEASA 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr16NP_001287169.1 IG_like 205..337 CDD:214653 26/131 (20%)
Ig <298..338 CDD:299845 12/41 (29%)
IG_like 352..447 CDD:214653 24/103 (23%)
Ig 358..439 CDD:143165 20/89 (22%)
OpcmlXP_006510497.1 Ig 44..132 CDD:416386 26/131 (20%)
Ig strand A' 44..49 CDD:409353 3/4 (75%)
Ig strand B 51..59 CDD:409353 3/7 (43%)
CDR1 59..63 CDD:409353 0/3 (0%)
FR2 64..70 CDD:409353 1/8 (13%)
Ig strand C 64..70 CDD:409353 1/8 (13%)
CDR2 71..83 CDD:409353 1/11 (9%)
Ig strand C' 72..76 CDD:409353 1/3 (33%)
Ig strand C' 80..83 CDD:409353 0/2 (0%)
FR3 84..118 CDD:409353 10/73 (14%)
Ig strand D 87..94 CDD:409353 2/6 (33%)
Ig strand E 97..103 CDD:409353 0/5 (0%)
Ig strand F 110..118 CDD:409353 3/7 (43%)
CDR3 119..123 CDD:409353 1/3 (33%)
Ig strand G 123..132 CDD:409353 5/9 (56%)
FR4 125..132 CDD:409353 3/7 (43%)
Ig_3 135..206 CDD:404760 18/80 (23%)
Ig strand A 135..138 CDD:409353 1/2 (50%)
Ig strand A' 144..148 CDD:409353 0/3 (0%)
Ig strand B 151..160 CDD:409353 4/8 (50%)
Ig strand C 165..170 CDD:409353 0/6 (0%)
Ig strand C' 171..174 CDD:409353 0/2 (0%)
Ig strand F 198..206 CDD:409353 1/7 (14%)
Ig_3 223..300 CDD:404760 8/26 (31%)
putative Ig strand A 224..230 CDD:409353 1/5 (20%)
Ig strand B 240..244 CDD:409353 1/3 (33%)
Ig strand C 253..257 CDD:409353
Ig strand E 279..283 CDD:409353
Ig strand F 293..298 CDD:409353
Ig strand G 306..309 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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