DRSC/TRiP Functional Genomics Resources

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Protein Alignment plh and AT1G52870

DIOPT Version :10

Sequence 1:NP_649511.2 Gene:plh / 40615 FlyBaseID:FBgn0037292 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_564615.3 Gene:AT1G52870 / 841720 AraportID:AT1G52870 Length:366 Species:Arabidopsis thaliana


Alignment Length:157 Identity:37/157 - (23%)
Similarity:62/157 - (39%) Gaps:5/157 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VLRGMISYGTLWPCGSLIEQTMIEKKTFRTYDWMKCLRFSLFGFFFMGPTIYVWIRLASVMWPRT 78
            ||..|:..|.::..|..|.|....|..|. .|..:.||..|.||...|...:.:.:....::|..
plant   182 VLAKMVISGVVYSVGDWIAQCYEGKPLFE-IDRARTLRSGLVGFTLHGSLSHFYYQFCEELFPFQ 245

  Fly    79 DIKSSLCKAITEQTAYDPMAISSFLFFMTL--MEGNSYAEAKREVSDKFLDAYKVGVIYWPCVQT 141
            |......|...:||.:.  ||.:.::|..|  :...|.....:|:...||.....|...||....
plant   246 DWWVVPVKVAFDQTVWS--AIWNSIYFTVLGFLRFESPISIFKELKATFLPMLTAGWKLWPFAHL 308

  Fly   142 VNFAFVPARNQVVFTSFFSMCWTTFLA 168
            :.:..||...::::.....:.|.|.|:
plant   309 ITYGLVPVEQRLLWVDCVELIWVTILS 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plhNP_649511.2 Mpv17_PMP22 107..168 CDD:461182 12/62 (19%)
AT1G52870NP_564615.3 Mpv17_PMP22 274..335 CDD:461182 11/60 (18%)

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