DRSC/TRiP Functional Genomics Resources

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Protein Alignment plh and AT5G19750

DIOPT Version :10

Sequence 1:NP_649511.2 Gene:plh / 40615 FlyBaseID:FBgn0037292 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_197476.1 Gene:AT5G19750 / 832095 AraportID:AT5G19750 Length:288 Species:Arabidopsis thaliana


Alignment Length:165 Identity:38/165 - (23%)
Similarity:77/165 - (46%) Gaps:9/165 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ITSKYKVLRGMISYGTLWPCGSLIEQTMIEKKTFRTYDWMKCLRFSLFGFFFMGPTIYVWIRLAS 72
            :.|...||...::...|...|.||.|..|.|.:  :.|..:.|.|:..|...:|||::.|....|
plant   121 LLSNSPVLTKAVTAALLNLVGDLICQLTINKTS--SLDKKRTLTFTFLGLGLVGPTLHFWYLYLS 183

  Fly    73 VMWPRTDIKSSLCKAITEQTAYDPMAISSFLFFMTLMEG---NSYAEAKREVSDKFLDAYKVGVI 134
            .:...:.:..::.:.:.:|..:.|:.:..||..:..:||   |...:.::|.:...:..:::   
plant   184 KVVTASGLSGAVIRLLLDQFVFAPIFVGVFLSAVVTLEGKPSNVIPKLQQEWTGAMIANWQL--- 245

  Fly   135 YWPCVQTVNFAFVPARNQVVFTSFFSMCWTTFLAY 169
             |...|.:||.|||...||:.::..::.|...|::
plant   246 -WIPFQFLNFRFVPQNYQVLASNVVALAWNVILSF 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plhNP_649511.2 Mpv17_PMP22 107..168 CDD:461182 14/63 (22%)
AT5G19750NP_197476.1 LbR-like <21..>69 CDD:248061
Mpv17_PMP22 220..278 CDD:461182 14/61 (23%)
Blue background indicates that the domain is not in the aligned region.

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