DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment plh and pxmp2

DIOPT Version :10

Sequence 1:NP_649511.2 Gene:plh / 40615 FlyBaseID:FBgn0037292 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_001004607.1 Gene:pxmp2 / 447868 ZFINID:ZDB-GENE-040912-184 Length:194 Species:Danio rerio


Alignment Length:172 Identity:38/172 - (22%)
Similarity:81/172 - (47%) Gaps:6/172 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VNITSKYKVLRGMISYGTLWPCGSLIEQTMIEKKTFRTYDWMKCL------RFSLFGFFFMGPTI 64
            :::..||.::...::.|.|...|:|:.|.:..:|..:.....|.:      .|:::|.|..||..
Zfish    22 LSLLKKYPIITKSVTSGILSALGNLLSQVLEYQKNVKENSPKKKISILGPVHFAIYGLFITGPVS 86

  Fly    65 YVWIRLASVMWPRTDIKSSLCKAITEQTAYDPMAISSFLFFMTLMEGNSYAEAKREVSDKFLDAY 129
            :.:..|..|:.|.|.....:.:.:.|:..:.|..:..|...|..:||.:.|:.:.::...:..|.
Zfish    87 HYFYHLLEVLLPTTVPYCLIKRLLLERLIFAPAFLLLFYVVMNALEGKTLADVQNKLKTSYWPAM 151

  Fly   130 KVGVIYWPCVQTVNFAFVPARNQVVFTSFFSMCWTTFLAYVK 171
            |:....|...|.:|..:||.:.:|:|.:..::.|..:||.|:
Zfish   152 KMNWKVWTPFQFININYVPVQFRVLFANMVALFWYAYLASVR 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plhNP_649511.2 Mpv17_PMP22 107..168 CDD:461182 13/60 (22%)
pxmp2NP_001004607.1 Mpv17_PMP22 129..190 CDD:461182 13/60 (22%)

Return to query results.
Submit another query.