DRSC/TRiP Functional Genomics Resources

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Protein Alignment plh and Mpv17

DIOPT Version :10

Sequence 1:NP_649511.2 Gene:plh / 40615 FlyBaseID:FBgn0037292 Length:193 Species:Drosophila melanogaster
Sequence 2:XP_038968365.1 Gene:Mpv17 / 360463 RGDID:1310512 Length:207 Species:Rattus norvegicus


Alignment Length:152 Identity:37/152 - (24%)
Similarity:75/152 - (49%) Gaps:8/152 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 GTLWPCGSLIEQTMIEKKTFRTYDWMKCLRFSLFGFFFMGPTIYVWIRLASVMWPRTDIKSSLCK 86
            |:|...|.:|.|.::|::..:.:...:.|..:..|..|:||.:..|.|:...:.|.|...::|.|
  Rat    55 GSLMGLGDIISQQLVERRGLQQHQTGRTLTMASLGCGFVGPVVGGWYRVLDHLIPGTTKVNALKK 119

  Fly    87 AITEQTAYDPMAISSFLFFMTLMEG----NSYAEAKREVSDKFLDAYKVGVIYWPCVQTVNFAFV 147
            .:.:|..:.|..:..||..:.::.|    :::|:.||:..|..:..|.:    ||.||..||..|
  Rat   120 MLLDQGGFAPCFLGCFLPLVGVLNGMSAQDNWAKLKRDYPDALITNYYL----WPAVQLANFYLV 180

  Fly   148 PARNQVVFTSFFSMCWTTFLAY 169
            |...::......::.|.::|::
  Rat   181 PLHYRLAVVQCVAVVWNSYLSW 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
plhNP_649511.2 Mpv17_PMP22 107..168 CDD:461182 15/64 (23%)
Mpv17XP_038968365.1 Mpv17_PMP22 140..201 CDD:461182 15/64 (23%)

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