DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jhbp1 and Jhbp4

DIOPT Version :10

Sequence 1:NP_649509.1 Gene:Jhbp1 / 40613 FlyBaseID:FBgn0037290 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_650518.1 Gene:Jhbp4 / 41948 FlyBaseID:FBgn0038394 Length:270 Species:Drosophila melanogaster


Alignment Length:252 Identity:67/252 - (26%)
Similarity:115/252 - (45%) Gaps:10/252 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 AVCLVIVIQAL--------RMVQAETPPYIKQCHRNDPKLVDCFIGAIEHLKPYLANGIPDIQLP 60
            ::||:.|....        ::...|.|.:::.|.|::|....||....|...|.||.|||:|.:.
  Fly    19 SICLITVTHGAYTREIVNDKLPLQERPSWLQTCKRSNPNEDKCFRQLFEGCFPALAAGIPEIGVK 83

  Fly    61 SVEPFKMDTLALQLTEGPQGYKITLKNMEAFGASNFKVTSLKLSEGSEPFKAKIVMPKLKIEAKY 125
            |.||..:|.:::....|........:::...|.||..|....|.........::.:|:|:|.|||
  Fly    84 SFEPLNIDQVSVSKGSGNLVLSGGFQDLVIRGPSNATVRRASLDLERRLLNFELELPRLRIRAKY 148

  Fly   126 TSSGVLLILPASGGGDFHANFEGVSADLTGKTSI--HAFKGANYLHIDALSLVLDVKDVKMSISG 188
            ...|.:|:||..|.||.....:.|...:..:.|:  ....|...:|||.:.:..||..:::.:..
  Fly   149 NLKGNILLLPLVGSGDVAMALKNVHTTVYTRISLRNETRTGDEIIHIDEMKVGFDVGAMRIHLKN 213

  Fly   189 AFNNNRILLEATNLFLRENSQVVLEAMQAQLQKKLASEFGKLANQLLKNVPVEQFYV 245
            .||.|.||..:.|.||.:|.:.|:..::..|:..||..|..|.|.:...:|.:.:.|
  Fly   214 LFNGNEILAASINSFLNQNGKEVIAELRPDLELGLADIFHGLWNNVFSKMPTKLWLV 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jhbp1NP_649509.1 JHBP 7..244 CDD:461956 65/246 (26%)
Jhbp4NP_650518.1 JHBP 42..270 CDD:214779 63/227 (28%)

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