DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jhbp1 and CG16820

DIOPT Version :10

Sequence 1:NP_649509.1 Gene:Jhbp1 / 40613 FlyBaseID:FBgn0037290 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_609627.1 Gene:CG16820 / 34730 FlyBaseID:FBgn0032495 Length:309 Species:Drosophila melanogaster


Alignment Length:232 Identity:60/232 - (25%)
Similarity:105/232 - (45%) Gaps:19/232 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 IKQCHRNDPKLVDCFIGAIEHLKPYLA-NGIPDIQLPSVEPFKMDTLALQLT-EGPQGYKITLKN 87
            :..|..|.|.|.:|..|.|:...|.|. .|:|:..:.|::|:.......:.| :|.|| .:.:||
  Fly    85 VTPCSLNSPDLNECIRGLIQSFAPKLRYQGVPEFNMDSIDPYFYKRGIFRYTNDGIQG-GLLIKN 148

  Fly    88 MEAFGASNFKVTSLKLSEGSEPF--KAKIVMPKLKIEAKYTSS---GVLLILPASGGGDFHANFE 147
            ||.:|.|..:|.|:..:.....|  |..:.:|:||....:.:.   |.|.::|.   |.|:...:
  Fly   149 MEIYGISQLQVNSVAANFTDNGFIIKLGVELPQLKAGGHFKADVKFGGLRLVPK---GPFNITID 210

  Fly   148 GVSADLTGKTSIHAF-KGANYLHIDALSLVLDVKDVKMSISGAF---NNNRILLEATNLFLRENS 208
            .:.|.:.....|... .|...|.:..|:..:::.|.|:..:|.|   |.|.::|...|..|.|.:
  Fly   211 NIKATILTDGHIEQLPSGQQRLSLHRLNANVNIGDAKVVANGIFSDRNLNAMILNLVNENLPEIT 275

  Fly   209 QVVLEAMQAQLQKKLASEFGKLANQLLKNVPVEQFYV 245
            :|.:.|.:.|....|.:..    |:....||:|:|.|
  Fly   276 RVGIPATREQWAPILIAHI----NEFFAKVPIEKFLV 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jhbp1NP_649509.1 JHBP 7..244 CDD:461956 58/229 (25%)
CG16820NP_609627.1 JHBP 79..308 CDD:214779 59/230 (26%)

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