DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jhbp1 and CG3246

DIOPT Version :10

Sequence 1:NP_649509.1 Gene:Jhbp1 / 40613 FlyBaseID:FBgn0037290 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_608781.2 Gene:CG3246 / 33564 FlyBaseID:FBgn0031538 Length:445 Species:Drosophila melanogaster


Alignment Length:196 Identity:38/196 - (19%)
Similarity:77/196 - (39%) Gaps:23/196 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 HLKPYLANGIPDIQLPSVEPFKMDTLALQLTEGPQGY-KITLKNMEAFGASNFKVTSLKLSEGSE 108
            |.:.....|:|.:.:|       |.|.:...:...|. .:.:|.::|:|.|.|::..:.|.....
  Fly    59 HFQQEDPQGLPGVPVP-------DPLEVPNVKKSMGMANLDMKQVKAYGLSKFRIDKMNLDLKEM 116

  Fly   109 PFKAKIVMPKLKIEAKYTSSGVLLILPASGGGDFHANFEGVSADLTGKTSIHAFKGANYLHIDAL 173
            .|...:.:.::.::.:||.|...    :...|.|....:.|.|:   .|:..|.:....|..|.:
  Fly   117 RFNGGLQLDQMLVKGQYTLSSFF----SKANGPFTVVLKNVYAE---ATAFLAVERDGQLATDRI 174

  Fly   174 SLVLDVKDVKMSISGAFNNNRILLEATNLFLRENSQVVLEAMQ----AQLQKKLASEFGKLANQL 234
            .:.:...|:.|.    |.|..::.......:.....:|.:||:    .:..|||.||...:..:.
  Fly   175 KIDITFSDMTMD----FQNLGLVGSVFQSVVNGAPNLVFDAMKPFMLQEADKKLRSEINVMIQKT 235

  Fly   235 L 235
            |
  Fly   236 L 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jhbp1NP_649509.1 JHBP 7..244 CDD:461956 38/196 (19%)
CG3246NP_608781.2 JHBP 31..246 CDD:214779 38/196 (19%)
Grp7_allergen 260..418 CDD:319052
Blue background indicates that the domain is not in the aligned region.

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