DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc6 and MMS2

DIOPT Version :10

Sequence 1:NP_524230.2 Gene:Ubc6 / 40610 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_011428.1 Gene:MMS2 / 852793 SGDID:S000003055 Length:137 Species:Saccharomyces cerevisiae


Alignment Length:134 Identity:38/134 - (28%)
Similarity:60/134 - (44%) Gaps:19/134 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RLMRDFKRLQEDPPTGVSG----------APTDNNIMI-WNAVIFGPHDTPFEDGTFKLTIEFTE 61
            ::.|:| ||.|:...|..|          |.:|:..|. ||..|.||..:..|:..:.|:|:...
Yeast     3 KVPRNF-RLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGP 66

  Fly    62 EYPNKPPTVRFVSKVFHPNVY-ADGGICLDILQNR-WSPTYDVSAILTSIQSLLSDPNPNSPANS 124
            .||:.||.|.|:||:..|.|. ..|.:..|....| |...|.:..:|..::..::     :|||.
Yeast    67 NYPDSPPKVTFISKINLPCVNPTTGEVQTDFHTLRDWKRAYTMETLLLDLRKEMA-----TPANK 126

  Fly   125 TAAQ 128
            ...|
Yeast   127 KLRQ 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc6NP_524230.2 UBCc_UBE2A_2B 3..145 CDD:467410 38/134 (28%)
MMS2NP_011428.1 UEV_UBE2V 3..134 CDD:467427 38/134 (28%)

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