DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubc6 and UBC28

DIOPT Version :10

Sequence 1:NP_524230.2 Gene:Ubc6 / 40610 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001154446.1 Gene:UBC28 / 842728 AraportID:AT1G64230 Length:190 Species:Arabidopsis thaliana


Alignment Length:185 Identity:64/185 - (34%)
Similarity:94/185 - (50%) Gaps:42/185 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMI---------------------------------- 35
            |.:|::::.|.||:||||..|.....:.:::                                  
plant     2 ASKRILKELKDLQKDPPTSCSAVDNASKLLVLIELEDCCRRFSNCSCILLLEKSQDIAMAHVLLC 66

  Fly    36 --------WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDIL 92
                    |.|.|.||.|:|:..|.|.:||.|..:||.|||.|.|.:|||||||.::|.||||||
plant    67 PVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDIL 131

  Fly    93 QNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEKRVKACVEQ 147
            :.:|||...:|.:|.||.|||:||||:.|.....|.:||.:|.:||...::..::
plant   132 KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQK 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc6NP_524230.2 UBCc_UBE2A_2B 3..145 CDD:467410 64/181 (35%)
UBC28NP_001154446.1 UBCc_UBE2D 3..187 CDD:467412 63/184 (34%)

Return to query results.
Submit another query.