DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc6 and Ube2b

DIOPT Version :9

Sequence 1:NP_001246916.1 Gene:Ubc6 / 40610 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:XP_006246405.1 Gene:Ube2b / 81816 RGDID:708345 Length:180 Species:Rattus norvegicus


Alignment Length:151 Identity:130/151 - (86%)
Similarity:140/151 - (92%) Gaps:0/151 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPN 65
            |||||||||||||||||||||.||||||::||||.||||||||..||||||||||.|||:|||||
  Rat    29 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPN 93

  Fly    66 KPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLY 130
            |||||||:||:|||||||||.|||||||||||||||||:|||||||||.:|||||||||.|||||
  Rat    94 KPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLY 158

  Fly   131 KENRREYEKRVKACVEQSFID 151
            :||:|||||||.|.||||:.|
  Rat   159 QENKREYEKRVSAIVEQSWND 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc6NP_001246916.1 UQ_con 8..145 CDD:395127 118/136 (87%)
Ube2bXP_006246405.1 UQ_con 36..173 CDD:395127 118/136 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339327
Domainoid 1 1.000 252 1.000 Domainoid score I2024
eggNOG 1 0.900 - - E2759_KOG0419
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 274 1.000 Inparanoid score I2898
OMA 1 1.010 - - QHG54755
OrthoDB 1 1.010 - - D1292821at2759
OrthoFinder 1 1.000 - - FOG0001694
OrthoInspector 1 1.000 - - otm45133
orthoMCL 1 0.900 - - OOG6_101178
Panther 1 1.100 - - O PTHR24067
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1087
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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