DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc6 and ube2d1

DIOPT Version :10

Sequence 1:NP_524230.2 Gene:Ubc6 / 40610 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001072891.1 Gene:ube2d1 / 780353 XenbaseID:XB-GENE-954784 Length:147 Species:Xenopus tropicalis


Alignment Length:135 Identity:61/135 - (45%)
Similarity:88/135 - (65%) Gaps:0/135 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPT 69
            |.:|:.::...||.|||...|..|..:::..|.|.|.||.|:|::.|.|.|||.|..:||.|||.
 Frog     2 ALKRIQKELNDLQRDPPAQCSAGPVGDDLFHWQATIMGPTDSPYQGGVFFLTIHFPTDYPFKPPK 66

  Fly    70 VRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENR 134
            |.|.:|::|||:.::|.||||||:::|||...||.:|.||.|||.||||:.|.....||:||.::
 Frog    67 VAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDK 131

  Fly   135 REYEK 139
            .:|.:
 Frog   132 EKYNR 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc6NP_524230.2 UBCc_UBE2A_2B 3..145 CDD:467410 61/135 (45%)
ube2d1NP_001072891.1 UBCc_UBE2D 3..145 CDD:467412 60/134 (45%)

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