DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc6 and UBE2L3

DIOPT Version :9

Sequence 1:NP_001246916.1 Gene:Ubc6 / 40610 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001243284.1 Gene:UBE2L3 / 7332 HGNCID:12488 Length:212 Species:Homo sapiens


Alignment Length:134 Identity:39/134 - (29%)
Similarity:74/134 - (55%) Gaps:12/134 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 MRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVS 74
            |::|:.:|.|          :.|::.|..:|. |.:.|::.|.|::.|.|..|||.|||.:.|.:
Human    77 MKNFRNIQVD----------EANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKT 130

  Fly    75 KVFHPNVYADGGICLDILQ-NRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYE 138
            |::|||:...|.:||.::. ..|.|......::.|:.:|::||.|..|..:..|:.|.::|:::.
Human   131 KIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFC 195

  Fly   139 KRVK 142
            |..:
Human   196 KNAE 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc6NP_001246916.1 UQ_con 8..145 CDD:395127 39/134 (29%)
UBE2L3NP_001243284.1 COG5078 67..208 CDD:227410 39/134 (29%)
UBCc 67..207 CDD:214562 39/134 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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