DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc6 and ube2d3

DIOPT Version :9

Sequence 1:NP_001246916.1 Gene:Ubc6 / 40610 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001016064.1 Gene:ube2d3 / 548818 XenbaseID:XB-GENE-972278 Length:147 Species:Xenopus tropicalis


Alignment Length:135 Identity:58/135 - (42%)
Similarity:88/135 - (65%) Gaps:0/135 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPT 69
            |.:|:.::...|..|||...|..|..:::..|.|.|.||:|:|::.|.|.|||.|..:||.|||.
 Frog     2 ALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPK 66

  Fly    70 VRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENR 134
            |.|.::::|||:.::|.||||||:::|||...:|.:|.||.|||.||||:.|.....|::||.:|
 Frog    67 VAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDR 131

  Fly   135 REYEK 139
            .:|.:
 Frog   132 EKYNR 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc6NP_001246916.1 UQ_con 8..145 CDD:395127 57/132 (43%)
ube2d3NP_001016064.1 UBCc 1..146 CDD:412187 58/135 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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