DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc6 and ube2l3a

DIOPT Version :9

Sequence 1:NP_001246916.1 Gene:Ubc6 / 40610 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001002072.1 Gene:ube2l3a / 415162 ZFINID:ZDB-GENE-030131-2977 Length:154 Species:Danio rerio


Alignment Length:138 Identity:41/138 - (29%)
Similarity:77/138 - (55%) Gaps:12/138 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTV 70
            |:..|::|:.:|.|          ::||:.|..:|. |.:.|::.|.|::.|.|..|||.|||.:
Zfish    15 RKSGMKNFRNIQVD----------ESNILTWQGLIV-PDNPPYDKGAFRIEITFPAEYPFKPPKI 68

  Fly    71 RFVSKVFHPNVYADGGICLDILQ-NRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENR 134
            .|.:|::|||:...|.:||.::. ..|.|......::.|:.:|::||.|..|..:..|:.|.::|
Zfish    69 TFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDR 133

  Fly   135 REYEKRVK 142
            :::.|..:
Zfish   134 KKFFKNAE 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc6NP_001246916.1 UQ_con 8..145 CDD:395127 40/136 (29%)
ube2l3aNP_001002072.1 UQ_con 6..144 CDD:306648 41/138 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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