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Protein Alignment Ubc6 and ube2l3a
DIOPT Version :9
Sequence 1: | NP_001246916.1 |
Gene: | Ubc6 / 40610 |
FlyBaseID: | FBgn0004436 |
Length: | 151 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001002072.1 |
Gene: | ube2l3a / 415162 |
ZFINID: | ZDB-GENE-030131-2977 |
Length: | 154 |
Species: | Danio rerio |
Alignment Length: | 138 |
Identity: | 41/138 - (29%) |
Similarity: | 77/138 - (55%) |
Gaps: | 12/138 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 RRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTV 70
|:..|::|:.:|.| ::||:.|..:|. |.:.|::.|.|::.|.|..|||.|||.:
Zfish 15 RKSGMKNFRNIQVD----------ESNILTWQGLIV-PDNPPYDKGAFRIEITFPAEYPFKPPKI 68
Fly 71 RFVSKVFHPNVYADGGICLDILQ-NRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENR 134
.|.:|::|||:...|.:||.::. ..|.|......::.|:.:|::||.|..|..:..|:.|.::|
Zfish 69 TFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDR 133
Fly 135 REYEKRVK 142
:::.|..:
Zfish 134 KKFFKNAE 141
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Ubc6 | NP_001246916.1 |
UQ_con |
8..145 |
CDD:395127 |
40/136 (29%) |
ube2l3a | NP_001002072.1 |
UQ_con |
6..144 |
CDD:306648 |
41/138 (30%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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