DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc6 and CG7220

DIOPT Version :9

Sequence 1:NP_001246916.1 Gene:Ubc6 / 40610 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001097261.1 Gene:CG7220 / 36129 FlyBaseID:FBgn0033544 Length:190 Species:Drosophila melanogaster


Alignment Length:141 Identity:46/141 - (32%)
Similarity:69/141 - (48%) Gaps:8/141 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RRLMRDFKRLQEDPPTGVS--GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPT 69
            |||.::...|.::||.||:  ......|:..|...|.|...|.:|...|:|..:|..:||...|.
  Fly    45 RRLHKELMSLIKEPPPGVTIDTESVQQNLSEWKINIKGFEGTLYEGEDFQLLFKFNNKYPFDSPE 109

  Fly    70 VRFVSK--VFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSD-PNPNSPANSTAAQLYK 131
            |.|:..  ..||:||::|.|||.||...|||...|.::..||.|:||. .....|.::|   :|.
  Fly   110 VTFIGTNIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIASMLSSCREKKRPPDNT---IYV 171

  Fly   132 ENRREYEKRVK 142
            :...:..|:.|
  Fly   172 KTCNKNPKKTK 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc6NP_001246916.1 UQ_con 8..145 CDD:395127 45/140 (32%)
CG7220NP_001097261.1 UQ_con 46..187 CDD:278603 45/140 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438068
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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