DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc6 and ube2kb

DIOPT Version :10

Sequence 1:NP_524230.2 Gene:Ubc6 / 40610 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001008611.1 Gene:ube2kb / 30100 ZFINID:ZDB-GENE-980605-9 Length:200 Species:Danio rerio


Alignment Length:146 Identity:50/146 - (34%)
Similarity:84/146 - (57%) Gaps:4/146 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTPARRRLMRDFKRL---QEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEE 62
            |:..|.:|:.|:||.:   :|.....:.....|.|.......|.||.|||:|.|.::|.|:..|.
Zfish     1 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELKGEIAGPPDTPYEGGRYQLEIKIPET 65

  Fly    63 YPNKPPTVRFVSKVFHPNVYA-DGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTA 126
            ||..||.|||::|::|||:.: .|.||||||:::|:....:..:|.|:|:||:...|:.|.::..
Zfish    66 YPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVV 130

  Fly   127 AQLYKENRREYEKRVK 142
            |..||:|...:::..:
Zfish   131 ANQYKQNPEMFKQTAR 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc6NP_524230.2 UBCc_UBE2A_2B 3..145 CDD:467410 49/144 (34%)
ube2kbNP_001008611.1 UBCc_UBE2K 6..151 CDD:467420 48/141 (34%)
UBA_II_E2_UBE2K 163..200 CDD:270573
Blue background indicates that the domain is not in the aligned region.

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