DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc6 and Ube2a

DIOPT Version :10

Sequence 1:NP_524230.2 Gene:Ubc6 / 40610 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001013955.1 Gene:Ube2a / 298317 RGDID:1359534 Length:162 Species:Rattus norvegicus


Alignment Length:161 Identity:133/161 - (82%)
Similarity:142/161 - (88%) Gaps:10/161 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFED----------GTFKL 55
            |||||||||||||||||||||.||||||::||||:||||||||..|||||          |||||
  Rat     1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTHVETTGQLGTFKL 65

  Fly    56 TIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNS 120
            ||||||||||||||||||||:|||||||||.|||||||||||||||||:|||||||||.:|||||
  Rat    66 TIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNS 130

  Fly   121 PANSTAAQLYKENRREYEKRVKACVEQSFID 151
            ||||.|||||:||:|||||||.|.||||:.|
  Rat   131 PANSQAAQLYQENKREYEKRVSAIVEQSWRD 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc6NP_524230.2 UBCc_UBE2A_2B 3..145 CDD:467410 126/151 (83%)
Ube2aNP_001013955.1 UBCc_UBE2A_2B 3..155 CDD:467410 126/151 (83%)

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