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Protein Alignment Ubc6 and Ube2j1
DIOPT Version :9
Sequence 1: | NP_001246916.1 |
Gene: | Ubc6 / 40610 |
FlyBaseID: | FBgn0004436 |
Length: | 151 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001100112.2 |
Gene: | Ube2j1 / 297961 |
RGDID: | 1305067 |
Length: | 318 |
Species: | Rattus norvegicus |
Alignment Length: | 155 |
Identity: | 40/155 - (25%) |
Similarity: | 68/155 - (43%) |
Gaps: | 20/155 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPN 65
:.:||.:|||::...| :||.......|.::|:..|:..:.||.|:.|:.|.:...|....|||.
Rat 7 LKSPAVKRLMKEAAEL-KDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPM 70
Fly 66 KPPTVRFVSKVFHPNVYADG------GICLDILQNR---WSPTYDVSAILTSIQSLLSDPNPNSP 121
|||::..:: |:| .|||.|..:. |.|::.:...|.:|...: |.....
Rat 71 KPPSIILLT--------ANGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFM--PTKGEG 125
Fly 122 ANSTAAQLYKENRREYEKRVKACVE 146
|..:.....:|.|...:|....|.|
Rat 126 AIGSLDYTPEERRALAKKSQDFCCE 150
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Ubc6 | NP_001246916.1 |
UQ_con |
8..145 |
CDD:395127 |
36/145 (25%) |
Ube2j1 | NP_001100112.2 |
UBCc |
12..>119 |
CDD:238117 |
31/115 (27%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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