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Protein Alignment Ubc6 and Ube2e3
DIOPT Version :9
Sequence 1: | NP_001246916.1 |
Gene: | Ubc6 / 40610 |
FlyBaseID: | FBgn0004436 |
Length: | 151 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001041322.2 |
Gene: | Ube2e3 / 295686 |
RGDID: | 1308894 |
Length: | 207 |
Species: | Rattus norvegicus |
Alignment Length: | 139 |
Identity: | 56/139 - (40%) |
Similarity: | 83/139 - (59%) |
Gaps: | 1/139 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPN 65
:||.| :|:.::...:..|||...|..|..:||..|.:.|.||..:.:|.|.|.|.|.|:.:||.
Rat 59 LSTSA-KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPF 122
Fly 66 KPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLY 130
|||.|.|.::::|.|:.:.|.||||||::.|||...:|.:|.||.|||:|.||..|...:.|..|
Rat 123 KPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQY 187
Fly 131 KENRREYEK 139
..||.|:::
Rat 188 LTNRAEHDR 196
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Ubc6 | NP_001246916.1 |
UQ_con |
8..145 |
CDD:395127 |
53/132 (40%) |
Ube2e3 | NP_001041322.2 |
UQ_con |
65..202 |
CDD:395127 |
53/132 (40%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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