DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Ubc6 and Ube2s

DIOPT Version :9

Sequence 1:	NP_001246916.1	Gene:	Ubc6 / 40610	FlyBaseID:	FBgn0004436	Length:	151	Species:	Drosophila melanogaster
Sequence 2:	NP_001099694.1	Gene:	Ube2s / 292588	RGDID:	1564746	Length:	223	Species:	Rattus norvegicus

Alignment Length:	140	Identity:	46/140 - (32%)
Similarity:	75/140 - (53%)	Gaps:	0/140 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVR 71
            |.:.::...|..|||.|:...|.:.::......|.||..||:..|.|::.:...:::|..||...
  Rat    14 RLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGY 78

  Fly    72 FVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRRE 136
            |::|:|||||..:|.||:::|:..|:....:..:|.:|:.||..|||.|..|..|.:|..||..|
  Rat    79 FLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEE 143

  Fly   137 YEKRVKACVE 146
            |..|.:...|
  Rat   144 YAARARLLTE 153

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ubc6	NP_001246916.1	UQ_con	8..145	CDD:395127	44/136 (32%)
Ube2s	NP_001099694.1	COG5078	9..153	CDD:227410	45/138 (33%)
		UQ_con	16..152	CDD:278603	44/135 (33%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	159..223
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910