DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc6 and Ube2i

DIOPT Version :9

Sequence 1:NP_001246916.1 Gene:Ubc6 / 40610 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_037182.1 Gene:Ube2i / 25573 RGDID:3926 Length:158 Species:Rattus norvegicus


Alignment Length:150 Identity:64/150 - (42%)
Similarity:85/150 - (56%) Gaps:7/150 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDN-----NIMIWNAVIFGPHDTPFEDGTFKLTIEFT 60
            ||..|..||.::.|..::|.|.|....||.|     |:|.|...|.|...||:|.|.|||.:.|.
  Rat     1 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFK 65

  Fly    61 EEYPNKPPTVRFVSKVFHPNVYADGGICLDILQ--NRWSPTYDVSAILTSIQSLLSDPNPNSPAN 123
            ::||:.||..:|...:||||||..|.:||.||:  ..|.|...:..||..||.||::||...||.
  Rat    66 DDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQ 130

  Fly   124 STAAQLYKENRREYEKRVKA 143
            :.|..:|.:||.||||||:|
  Rat   131 AEAYTIYCQNRVEYEKRVRA 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc6NP_001246916.1 UQ_con 8..145 CDD:395127 60/142 (42%)
Ube2iNP_037182.1 UQ_con 8..152 CDD:395127 60/142 (42%)
Interaction with SUMO1. /evidence=ECO:0000250 13..18 1/4 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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