DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc6 and Ube2m

DIOPT Version :10

Sequence 1:NP_524230.2 Gene:Ubc6 / 40610 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_663553.1 Gene:Ube2m / 22192 MGIID:108278 Length:183 Species:Mus musculus


Alignment Length:242 Identity:48/242 - (19%)
Similarity:70/242 - (28%) Gaps:109/242 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SIKDGSTPTDISTTSSTTEDKLCSGCGCLIKDRYIYRVMEDSYHESCLRCSCCQLSLSSFKKCFS 84
            |.:....|..:.||.....|...:|.||||:.|                       |...||...
Mouse   625 SCRRSKVPDVLFTTIDLPADANITGKGCLIQAR-----------------------LCRTKKKAQ 666

  Fly    85 RHGNI--------YCEHD-HQMLYGKRCRRCM--------------TLLL--------------- 111
            ..||.        :.|:: |..|..|...|.|              |:||               
Mouse   667 GEGNATAISNLLPFLEYELHTQLMNKLKLRGMNALFGLRIQISVGETMLLGLASATGVYLTALPG 731

  Fly   112 ----------PTDIVHRVHFMYYHAQCFSCCSCQRPFNLGDEYHVFDGEVFCRN-DYQSICNFQT 165
                      |:||.:..|.          .:.|:..|          :...:| |...|     
Mouse   732 PGGIQIAGKTPSDITYEQHI----------SNMQKKIN----------DTIAKNKDLYEI----- 771

  Fly   166 ISNPDPLMEEVVRSEIHRKTPKRPRTILNAQQRRQFKTAFERSSKPS 212
              ||..::||::.|.|     ..||     |:.|.|::..|.|.:.|
Mouse   772 --NPPEVVEEIIGSPI-----PEPR-----QRSRLFRSQSESSDEVS 806

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc6NP_524230.2 UBCc_UBE2A_2B 3..145 CDD:467410 31/172 (18%)
Ube2mNP_663553.1 Interaction with UBA3. /evidence=ECO:0000250 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
UBCc_UBE2F_UBE2M 29..166 CDD:467414
Blue background indicates that the domain is not in the aligned region.

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